RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 MYH9P35579 1960 aaKnown RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 GAKO14976 1311 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 PTPRFP10586 1907 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 PITPNM1O00562 1244 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CALUO43852 315 aaPredicted RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 SLITRK5O94991 958 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CSH1P0DML2 217 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CSH2P0DML3 217 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CYP2A6P11509 494 aaPredicted RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 OSBPP22059 807 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ADORA2AP29274 412 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 HNF1BP35680 557 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 HTR3AP46098 478 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 TARDBPQ13148 414 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 SLAMF1Q13291 335 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 AP3B2Q13367 1082 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 TOP3AQ13472 1001 aaPredicted RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 C21orf62-AS1Q17RA5 79 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 SLC36A3Q495N2 470 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CYP27C1Q4G0S4 372 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ARSKQ6UWY0 536 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 MFSD7Q6UXD7 560 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 DPY19L3Q6ZPD9 716 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CFAP77Q6ZQR2 320 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CATSPER4Q7RTX7 472 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 DDIASQ8IXT1 998 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 AFAP1L2Q8N4X5 818 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 PNMA1Q8ND90 353 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 MAGEE2Q8TD90 523 aaPredicted RBP9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 S100ZQ8WXG8 99 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 NXNL1Q96CM4 212 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 NEDD4LQ96PU5 975 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 TUFT1Q9NNX1 390 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 CHRAC1Q9NRG0 131 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 ACOXLQ9NUZ1 547 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 EXD2Q9NVH0 621 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 NUP50Q9UKX7 468 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 NRAPQ86VF7 1730 aa9.74□□□□□ -0.85
PTCHD4-201ENST00000339488 USP17L3A6NCW0 530 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 USP17L4A6NCW7 530 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SAGE2PA6NJ88 616 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TISP43B9A030 160 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SMLR1H3BR10 107 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TOR1AO14656 332 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SYN3O14994 580 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 GRIN3BO60391 1043 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 GSRP00390 522 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 P4HBP07237 508 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 GCLMP48507 274 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 BCAMP50895 628 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 MAPK12P53778 367 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SELPLGQ14242 412 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PTPRRQ15256 657 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 HIST2H2ACQ16777 129 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ESCO2Q56NI9 601 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TREML2Q5T2D2 321 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 N4BP2L1Q5TBK1 243 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TTC39BQ5VTQ0 682 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 LRRC8EQ6NSJ5 796 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF773Q6PK81 442 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 GK5Q6ZS86 529 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 USP17L1Q7RTZ2 530 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 KRT25Q7Z3Z0 450 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 OR7A2PQ8NGA2 310 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 RPL3LQ92901 407 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SIPA1Q96FS4 1042 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 CNDP1Q96KN2 507 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 LPIN3Q9BQK8 851 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 LIN7BQ9HAP6 207 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ENTPD7Q9NQZ7 604 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 C14orf119Q9NWQ9 140 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 GLTPQ9NZD2 209 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SUCOQ9UBS9 1254 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 IPO11Q9UI26 975 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SHOC2Q9UQ13 582 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TP53BP1Q12888 1972 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF780AO75290 641 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 CALB1P05937 261 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 CYP2A7P20853 494 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 HLCSP50747 726 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SLC12A2P55011 1212 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 DGCR6Q14129 220 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 GPR68Q15743 365 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TBC1D10BQ4KMP7 808 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 NDUFAF5Q5TEU4 345 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 FAXCQ5TGI0 409 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TXNRD3NBQ6F5E7 133 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 C12orf56Q8IXR9 622 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 CCDC185Q8N715 623 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TAS1R2Q8TE23 839 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SEPT1Q8WYJ6 367 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TMEM80Q96HE8 168 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 RADILQ96JH8 1075 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 RNF170Q96K19 258 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 FOXP3Q9BZS1 431 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms