RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ALDH4A1P30038 563 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 RPL26P61254 145 aaKnown RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 ANKRD22Q5VYY1 191 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 OVOS1Q6IE37 1185 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 DNAJC14Q6Y2X3 702 aaPredicted RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 ARCQ7LC44 396 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 TNS4Q8IZW8 715 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 GLIS1Q8NBF1 620 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 AZIN2Q96A70 460 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 RNF157Q96PX1 679 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 TCF12Q99081 682 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 CPNE1Q99829 537 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 SNRNP25Q9BV90 132 aaKnown RBP16.2■□□□□ 0.18
NPHP3-201ENST00000337331 POLE4Q9NR33 117 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 GDAP2Q9NXN4 497 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 CEPT1Q9Y6K0 416 aa16.2■□□□□ 0.18
NPHP3-201ENST00000337331 hCG_1818297A0A087WSY0 165 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 KRBA1A5PL33 1030 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 FAM47E-STBD1D6RA91 191 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ZNF143P52747 638 aaPredicted RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 FKBP1AP62942 108 aaKnown RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CAPSQ13938 189 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 NFE2Q16621 373 aaPredicted RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CYP51A1Q16850 503 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CACHD1Q5VU97 1274 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 IQSEC1Q6DN90 963 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 C10orf107Q8IVU9 208 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 LRRN4Q8WUT4 740 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 A0A1W2PQ72 361 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 DENRO43583 198 aaKnown RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 RECQL4O94761 1208 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CELF2O95319 508 aaKnown RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 RENBPP51606 427 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 PRKAA2P54646 552 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 MYBPC1Q00872 1141 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 DPYSQ14117 519 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 BTG3Q14201 252 aaPredicted RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 NR6A1Q15406 480 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 FGD3Q5JSP0 725 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SPANXN3Q5MJ09 141 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 DEPDC1Q5TB30 811 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CHST15Q7LFX5 561 aaPredicted RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ZC3H7AQ8IWR0 971 aaKnown RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ELMOD2Q8IZ81 293 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ZDHHC14Q8IZN3 488 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ULBP1Q9BZM6 244 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 PDGFCQ9NRA1 345 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 TRHDEQ9UKU6 1024 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SNTNA6NMZ2 147 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 TMEM114B3SHH9 223 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CHADO15335 359 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 TEX28O15482 410 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ITGAVP06756 1048 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SNHG28P0DPA3 235 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 RCVRNP35243 200 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 NPY2RP49146 381 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 MSLNQ13421 630 aaPredicted RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CTXN3Q4LDR2 81 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 IL23RQ5VWK5 629 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ZNF280DQ6N043 979 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 KIAA0319LQ8IZA0 1049 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SLC15A4Q8N697 577 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SLC44A1Q8WWI5 657 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 COPS5Q92905 334 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 CLPBQ9H078 707 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ADARB2Q9NS39 739 aaKnown RBP16.19■□□□□ 0.18
NPHP3-201ENST00000337331 HES2Q9Y543 173 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ROBO3Q96MS0 1386 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 STX16-NPEPL1H3BU86 382 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SERPINF2P08697 491 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 ATP6V1B2P21281 511 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 FAM182AQ5T1J6 154 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 SLC22A16Q86VW1 577 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 OR52K1Q8NGK4 314 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 HM13Q8TCT9 377 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 C1orf21Q9H246 121 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 NUDT5Q9UKK9 219 aa16.19■□□□□ 0.18
NPHP3-201ENST00000337331 E7ENX8 843 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 EIF3FO00303 357 aaPredicted RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 MRASO14807 208 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 PSMB4P28070 264 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 GTF2A2P52657 109 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 FASTKQ14296 549 aaKnown RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 SLC22A9Q8IVM8 553 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 MIER2Q8N344 545 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 METTL25Q8N6Q8 603 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 CDT1Q9H211 546 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 TBC1D13Q9NVG8 400 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 A0A0A0MRY4 1105 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 CBX4O00257 560 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 TPP1O14773 563 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 TFECO14948 347 aaPredicted RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 TOMM70O94826 608 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 FARP2O94887 1054 aaPredicted RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 CLK3P49761 638 aaKnown RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 BMXP51813 675 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 RUNX1T1Q06455 604 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms