RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 STX7O15400 261 aaKnown RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 MTSS1O43312 755 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 LINGO3P0C6S8 592 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 NMBRP28336 390 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 CDH17Q12864 832 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 CCNYL1Q8N7R7 359 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 TEKT5Q96M29 485 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 HERC2P3Q9BVR0 1158 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 UTP6Q9NYH9 597 aaKnown RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 IQANK1A0A1B0GTG1 560 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 PIGNO95427 931 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 ALPIP09923 528 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 CD72P21854 359 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 SCNN1AP37088 669 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 MPP2Q14168 576 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 C2orf15Q8WU43 125 aaKnown RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 MYLK2Q9H1R3 596 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 PAPOLBQ9NRJ5 636 aaKnown RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 PSMC3IPQ9P2W1 217 aaPredicted RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 CLDN11O75508 207 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 KRT38O76015 456 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 LUC7L3O95232 432 aaKnown RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 NUDT17P0C025 328 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 TYRP14679 529 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 KLHL38Q2WGJ6 581 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 ATAT1Q5SQI0 421 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 Q6ZVU0 165 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 LIMS2Q7Z4I7 341 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 TTC7BQ86TV6 843 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 NAT8LQ8N9F0 302 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 HJURPQ8NCD3 748 aaPredicted RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 C2orf49Q9BVC5 232 aaPredicted RBP16.04■□□□□ 0.16
PDGFB-201ENST00000331163 SEPT3Q9UH03 358 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 CD84Q9UIB8 345 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 FAM50BQ9Y247 325 aa16.04■□□□□ 0.16
PDGFB-201ENST00000331163 CNTRLQ7Z7A1 2325 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 WASH3PC4AMC7 463 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 SNUPNO95149 360 aaKnown RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 BNIP1Q12981 228 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 RIPK1Q13546 671 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 ZNF460Q14592 562 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 FNDC3BQ53EP0 1204 aaKnown RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 RNF220Q5VTB9 566 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 DENND6AQ8IWF6 608 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 CHPFQ8IZ52 775 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 EIF1ADQ8N9N8 165 aaKnown RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 SHKBP1Q8TBC3 707 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 ATP2A3Q93084 1043 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 HDAC10Q969S8 669 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 OSBPL2Q9H1P3 480 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 HBS1LQ9Y450 684 aaKnown RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 ARL5AQ9Y689 179 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 THSD7BQ9C0I4 1608 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 HACD1B0YJ81 288 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 ABLIM3O94929 683 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 CD70P32970 193 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 CTSOP43234 321 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 PLK1P53350 603 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 DLG2Q15700 870 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 SERPINA13PQ6UXR4 307 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 ZCCHC23Q6ZST2 131 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 SHROOM3Q8TF72 1996 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 NCF1BA6NI72 391 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 NCF1CA8MVU1 366 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 MATN3O15232 486 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 MAP3K13O43283 966 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 IL1BP01584 269 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 NCF1P14598 390 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 DRG2P55039 364 aaKnown RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 FASTKD1Q53R41 847 aaKnown RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 TCEAL5Q5H9L2 206 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 FAM124AQ86V42 546 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 LRRC37BQ96QE4 947 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 RAB3IPQ96QF0 476 aaPredicted RBP16.03■□□□□ 0.16
PDGFB-201ENST00000331163 LRRC40Q9H9A6 602 aa16.03■□□□□ 0.16
PDGFB-201ENST00000331163 GPR39O43194 453 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 SMAD6O43541 496 aaKnown RBP16.02■□□□□ 0.16
PDGFB-201ENST00000331163 TMCC1O94876 653 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 PPIDQ08752 370 aaKnown RBP16.02■□□□□ 0.16
PDGFB-201ENST00000331163 BLMHQ13867 455 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 PPM1JQ5JR12 505 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 GLT6D1Q7Z4J2 308 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 KCNMB4Q86W47 210 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 GBP7Q8N8V2 638 aaPredicted RBP16.02■□□□□ 0.16
PDGFB-201ENST00000331163 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.02■□□□□ 0.16
PDGFB-201ENST00000331163 CFAP61Q8NHU2 1237 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 LRRC8CQ8TDW0 803 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 RXFP1Q9HBX9 757 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 CYP4F12Q9HCS2 524 aa16.02■□□□□ 0.16
PDGFB-201ENST00000331163 CHADO15335 359 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 MAFKO60675 156 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 POLR2EP19388 210 aaKnown RBP16.02■□□□□ 0.15
PDGFB-201ENST00000331163 RAD51Q06609 339 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 TSNAXIP1Q2TAA8 658 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 SPATA17Q96L03 361 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 TBATAQ96M53 351 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 BRD9Q9H8M2 597 aa16.02■□□□□ 0.15
PDGFB-201ENST00000331163 NRG2O14511 850 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms