RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TNFRSF12AQ9NP84 129 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 OSER1Q9NX31 292 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 KCNU1A8MYU2 1149 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 SLC4A1P02730 911 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 AKR1A1P14550 325 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 RGS2P41220 211 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 FOLH1Q04609 750 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 GPR162Q16538 588 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 LAYNQ6UX15 382 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 RANBP10Q6VN20 620 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 SPATA24Q86W54 205 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 PQLC1Q8N2U9 271 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 GALNT4Q8N4A0 578 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 HAPLN3Q96S86 360 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 MTG1Q9BT17 334 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-201ENST00000320755 EFCAB1Q9HAE3 211 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 VTI1BQ9UEU0 232 aa17.57■□□□□ 0.4
COL9A1-201ENST00000320755 ATP6AP2A0A1C7CYW4 349 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CACNG3O60359 315 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 ATP6AP2O75787 350 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 TBX18O95935 607 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 ADRA1AP35348 466 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 SLC10A7Q0GE19 358 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 PPP1R3AQ16821 1122 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CD300LGQ6UXG3 332 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 LRGUKQ96M69 825 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 MRPL57Q9BQC6 102 aaKnown RBP17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CRYL1Q9Y2S2 319 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 KCTD3Q9Y597 815 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CNTN5O94779 1100 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 HAPLN1P10915 354 aaPredicted RBP17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CSRP3P50461 194 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 DSC2Q02487 901 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 MIB1Q86YT6 1006 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 C2CD4AQ8NCU7 369 aaPredicted RBP17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CNDP1Q96KN2 507 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 ZBTB26Q9HCK0 441 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 FGF10O15520 208 aaPredicted RBP17.56■□□□□ 0.4
COL9A1-201ENST00000320755 GJB3O75712 270 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CAPN15O75808 1086 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 IGLV3-25P01717 112 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 COL6A2P12110 1019 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 HOXC8P31273 242 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 GRK4P32298 578 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 YWHAHQ04917 246 aaPredicted RBP17.56■□□□□ 0.4
COL9A1-201ENST00000320755 ZNF423Q2M1K9 1284 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 FAM83EQ2M2I3 478 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 BRMS1LQ5PSV4 323 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 TRPC7Q9HCX4 862 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 CCDC167Q9P0B6 97 aa17.56■□□□□ 0.4
COL9A1-201ENST00000320755 SDHDO14521 159 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 DNAJB2P25686 324 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 NSUN2Q08J23 767 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 PTPRCAPQ14761 206 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 PDK3Q15120 406 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 FBXL19Q6PCT2 694 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 CIR1Q86X95 450 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 CNTN4Q8IWV2 1026 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 LZTR1Q8N653 840 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 RTL3Q8N8U3 475 aaKnown RBP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 ANKRD49Q8WVL7 239 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 HMCESQ96FZ2 354 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 TREX1Q9NSU2 369 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 PSMD13Q9UNM6 376 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 ATP5F1P24539 256 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 CYP2C18P33260 490 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 IRX1P78414 480 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 EFEMP1Q12805 493 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 HNRNPDQ14103 355 aaKnown RBP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 PIGGQ5H8A4 983 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 PIK3R6Q5UE93 754 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 CLEC6AQ6EIG7 209 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 CEP70Q8NHQ1 597 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 SH3RF2Q8TEC5 729 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 IGSF5Q9NSI5 407 aa17.55■□□□□ 0.4
COL9A1-201ENST00000320755 PRG3Q9Y2Y8 225 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-201ENST00000320755 SLCO1B7G3V0H7 640 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PIRTP0C851 137 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ETS2P15036 469 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ME2P23368 584 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ARPP19P56211 112 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 TUSC3Q13454 348 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ALFQ53S48 1182 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ST13P4Q8IZP2 240 aaPredicted RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 HDAC10Q969S8 669 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 SMOC2Q9H3U7 446 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 NOL6Q9H6R4 1146 aaKnown RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ALG9Q9H6U8 611 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PRPF19Q9UMS4 504 aaKnown RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 TCAF2A6NFQ2 919 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 GPC4O75487 556 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 SOAT2O75908 522 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PGM3O95394 542 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 SERPINH1P50454 418 aaKnown RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 ZNF157P51786 506 aaPredicted RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 PRKAA2P54646 552 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 MLLT6P55198 1093 aaPredicted RBP17.54■□□□□ 0.4
COL9A1-201ENST00000320755 C1QTNF8P60827 252 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 SULT2A1Q06520 285 aa17.54■□□□□ 0.4
COL9A1-201ENST00000320755 AGKQ53H12 422 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms