RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 CADM1Q9BY67 442 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 RNF38Q9H0F5 515 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 THAP1Q9NVV9 213 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 STOML1Q9UBI4 398 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 A0A0U1RQS6 177 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 KDSRQ06136 332 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 THOC5Q13769 683 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 HNRNPDQ14103 355 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 ANO4Q32M45 955 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
RNF4-201ENST00000314289 IL31Q6EBC2 164 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 CNSTQ6PJW8 725 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 KDELC1Q6UW63 502 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 TREML1Q86YW5 311 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 OR6P1Q8NGX9 317 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 MCUR1Q96AQ8 359 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 CLSTN3Q9BQT9 956 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 MAN1C1Q9NR34 630 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
RNF4-201ENST00000314289 COCHO43405 550 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 TGDSO95455 350 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 KLKB1P03952 638 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 VHLP40337 213 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 ZNF33AQ06730 810 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 NAB1Q13506 487 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 TAF12Q16514 161 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 USP41Q3LFD5 358 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 BLOC1S5Q8TDH9 187 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 SCG3Q8WXD2 468 aaKnown RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 IMP4Q96G21 291 aaKnown RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 ELMO2Q96JJ3 720 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 ZNF333Q96JL9 665 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 MRPL9Q9BYD2 267 aaKnown RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 SLC25A51Q9H1U9 297 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 PAK6Q9NQU5 681 aaPredicted RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 TLK1Q9UKI8 766 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 RUVBL2Q9Y230 463 aaKnown RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
RNF4-201ENST00000314289 PLXNA3P51805 1871 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 F5H5T6 163 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 H7C4K7 107 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 BIRC5O15392 142 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 GYG2O15488 501 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 ARSDP51689 593 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 NDST2P52849 883 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 DEFB103AP81534 67 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 PTPRRQ15256 657 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 SORT1Q99523 831 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 VCXQ9H320 206 aa12.54□□□□□ -0.4
RNF4-201ENST00000314289 IGLV3-10A0A075B6K4 115 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 G3V2L1 256 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 TIMM44O43615 452 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 CHRNGP07510 517 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SLC35E2BP0CK96 405 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 SERINC3Q13530 473 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SIRPB2Q5JXA9 342 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SLC39A5Q6ZMH5 540 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 RINLQ6ZS11 566 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 MAVSQ7Z434 540 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 PHC3Q8NDX5 983 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 PIWIL2Q8TC59 973 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 NRG4Q8WWG1 115 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 IGSF21Q96ID5 467 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 CWH43Q9H720 699 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 OLA1Q9NTK5 396 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 ETAA1Q9NY74 926 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ARL5AQ9Y689 179 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 FAM95CA0A1B0GW59 222 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 WASH4PA8MWX3 477 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 PSMD3O43242 534 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 IGLV3-27P01718 113 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 HTR7P34969 479 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SERPINH1P50454 418 aaKnown RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 EGFL6Q8IUX8 553 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ZNF781Q8N8C0 355 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ARRDC2Q8TBH0 407 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ZNF398Q8TD17 642 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 STMN2Q93045 179 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 NXNL1Q96CM4 212 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SPATA17Q96L03 361 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SLC22A12Q96S37 553 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 RHOJQ9H4E5 214 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 DNMT3LQ9UJW3 386 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 PRR5-ARHGAP8B1AHC4 643 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 SERPINE1P05121 402 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 PRSS56P0CW18 603 aa12.53□□□□□ -0.4
RNF4-201ENST00000314289 ESRRAP11474 423 aaPredicted RBP12.53□□□□□ -0.4
RNF4-201ENST00000314289 ITGB8P26012 769 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms