RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ZZEF1O43149 2961 aa19.76■□□□□ 0.75
LIME1-201ENST00000309546 DMXL2Q8TDJ6 3036 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 SPTY2D1-AS1A0A0U1RR47 76 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 ARHGAP42A6NI28 874 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 EIF3CLB5ME19 914 aaKnown RBP19.75■□□□□ 0.75
LIME1-201ENST00000309546 H3BM21 787 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 AREL1O15033 823 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 ALPPL2P10696 532 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 ACP1P24666 158 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 MIPP30301 263 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 NDST2P52849 883 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 HNRNPKP61978 463 aaKnown RBP eCLIP19.75■□□□□ 0.75
LIME1-201ENST00000309546 ILKQ13418 452 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 NR1I3Q14994 352 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 C19orf48Q6RUI8 117 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 RFX8Q6ZV50 586 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 LUZP1Q86V48 1076 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 TRIM11Q96F44 468 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 IFT43Q96FT9 208 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 LENG8Q96PV6 779 aaPredicted RBP19.75■□□□□ 0.75
LIME1-201ENST00000309546 EIF3CQ99613 913 aaKnown RBP19.75■□□□□ 0.75
LIME1-201ENST00000309546 CBX8Q9HC52 389 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 DKK3Q9UBP4 350 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 MFHAS1Q9Y4C4 1052 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 PKD1L2Q7Z442 2459 aa19.75■□□□□ 0.75
LIME1-201ENST00000309546 ADAMTS20P59510 1910 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 NEMP2A6NFY4 417 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 DFFAO00273 331 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 PRAMEF11O60813 436 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 NEBLO76041 1014 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 TM7SF2O76062 418 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 NME1P15531 152 aaKnown RBP19.74■□□□□ 0.75
LIME1-201ENST00000309546 TIMP2P16035 220 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 ERCC2P18074 760 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 PAPOLAP51003 745 aaKnown RBP19.74■□□□□ 0.75
LIME1-201ENST00000309546 THOP1P52888 689 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 TARDBPQ13148 414 aaKnown RBP eCLIP19.74■□□□□ 0.75
LIME1-201ENST00000309546 TPRG1LQ5T0D9 272 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 CFAP58Q5T655 872 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 ZNF548Q8NEK5 533 aaPredicted RBP19.74■□□□□ 0.75
LIME1-201ENST00000309546 FNIP1Q8TF40 1166 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 ASB12Q8WXK4 309 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 NXPE2Q96DL1 559 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.74■□□□□ 0.75
LIME1-201ENST00000309546 C1QTNF7Q9BXJ2 289 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 EDEM3Q9BZQ6 932 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 SP110Q9HB58 689 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 NLGN3Q9NZ94 848 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 DKK4Q9UBT3 224 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 ACACAQ13085 2346 aa19.74■□□□□ 0.75
LIME1-201ENST00000309546 LRCH4O75427 683 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 CSF2P04141 144 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 GIMD1P0DJR0 217 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 MYF5P13349 255 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 IGFALSP35858 605 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 PFN3P60673 137 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 FANCCQ00597 558 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 CYP4V2Q6ZWL3 525 aaPredicted RBP19.73■□□□□ 0.75
LIME1-201ENST00000309546 NPWQ8N729 165 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 PAF1Q8N7H5 531 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 APOLD1Q96LR9 279 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 CPEB1Q9BZB8 566 aaKnown RBP19.73■□□□□ 0.75
LIME1-201ENST00000309546 MRPL47Q9HD33 250 aaKnown RBP19.73■□□□□ 0.75
LIME1-201ENST00000309546 COQ6Q9Y2Z9 468 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 GPSM3Q9Y4H4 160 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 KNTC1P50748 2209 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 APC2O95996 2303 aa19.73■□□□□ 0.75
LIME1-201ENST00000309546 FAM208BQ5VWN6 2430 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 K7ESM1 405 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 SCAMP1O15126 338 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 PALMO75781 387 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 MYBL1P10243 752 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 JUNDP17535 347 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 INSM1Q01101 510 aaPredicted RBP19.72■□□□□ 0.75
LIME1-201ENST00000309546 ELP6Q0PNE2 266 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 GRM3Q14832 879 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 KLHL40Q2TBA0 621 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 FIGNQ5HY92 759 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 ARHGAP36Q6ZRI8 547 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 CENPTQ96BT3 561 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 CINPQ9BW66 212 aaPredicted RBP19.72■□□□□ 0.75
LIME1-201ENST00000309546 SUV39H2Q9H5I1 410 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 KLF15Q9UIH9 416 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 CLCA2Q9UQC9 943 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 AK5Q9Y6K8 562 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 CHD6Q8TD26 2715 aa19.72■□□□□ 0.75
LIME1-201ENST00000309546 PRKCGP05129 697 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 CKMT1AP12532 417 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 RGRP47804 291 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 UBASH3AP57075 661 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 EIF2B5Q13144 721 aaKnown RBP19.71■□□□□ 0.75
LIME1-201ENST00000309546 PTK2BQ14289 1009 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 IRF4Q15306 451 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 SMTNL2Q2TAL5 461 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 ERAP2Q6P179 960 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 CAMK1DQ8IU85 385 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 ARHGAP12Q8IWW6 846 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 RBFAQ8N0V3 343 aa19.71■□□□□ 0.75
LIME1-201ENST00000309546 TP53I13Q8NBR0 393 aaPredicted RBP19.71■□□□□ 0.75
LIME1-201ENST00000309546 TSEN2Q8NCE0 465 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms