RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ME2P23368 584 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TM4SF4P48230 202 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SERPINH1P50454 418 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PAPOLAP51003 745 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ART3Q13508 389 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ACAP2Q15057 778 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TSTD2Q5T7W7 516 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HACD2Q6Y1H2 254 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CHSY3Q70JA7 882 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SPATA22Q8NHS9 363 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 LPPQ93052 612 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CCDC124Q96CT7 223 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SIK2Q9H0K1 926 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 POPDC3Q9HBV1 291 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 OLA1Q9NTK5 396 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 UBP1Q9NZI7 540 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CNOT11Q9UKZ1 510 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MIA3Q5JRA6 1907 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MYLKQ15746 1914 aa10.1□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DENRO43583 198 aaKnown RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 BCAS2O75934 225 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MAGEA11P43364 429 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 WNT3AP56704 352 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NFKB2Q00653 900 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FLOT2Q14254 428 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TRIP10Q15642 601 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CCL14Q16627 93 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZNF423Q2M1K9 1284 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TECRLQ5HYJ1 363 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 FAM26DQ5JW98 314 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GNASQ5JWF2 1037 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 GDF6Q6KF10 455 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ESRP1Q6NXG1 681 aaKnown RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC30A9Q6PML9 568 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CD300LGQ6UXG3 332 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TRIM67Q6ZTA4 783 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MFN1Q8IWA4 741 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PELI3Q8N2H9 469 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TEX26Q8N6G2 289 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ACVR1CQ8NER5 493 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 OR10T2Q8NGX3 314 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 USP33Q8TEY7 942 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NUF2Q9BZD4 464 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 YIPF3Q9GZM5 350 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MFSD1Q9H3U5 465 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 EPB41L1Q9H4G0 881 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 WDR41Q9HAD4 459 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MEAF6Q9HAF1 191 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MAN1C1Q9NR34 630 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IGSF5Q9NSI5 407 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TMEM248Q9NWD8 314 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 COMMD8Q9NX08 183 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZDHHC2Q9UIJ5 367 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ADAMTS6Q9UKP5 1117 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RAB26Q9ULW5 256 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PADI3Q9ULW8 664 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DTNAQ9Y4J8 743 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 E2F8A0AVK6 867 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CCDC189A1A4V9 331 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IPO13O94829 963 aaKnown RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MT-CYBP00156 380 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CAPNS1P04632 268 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 EPHA3P29320 983 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TAS2R39P59534 338 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MPP1Q00013 466 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 YWHAHQ04917 246 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TCHHL1Q5QJ38 904 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ARTNQ5T4W7 220 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MFSD14CQ5VZR4 134 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 CEP97Q8IW35 865 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HEXDCQ8WVB3 486 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TADA1Q96BN2 335 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 NXNL1Q96CM4 212 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC39A13Q96H72 371 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 OMDQ99983 421 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MRPL1Q9BYD6 325 aaKnown RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 ZYG11BQ9C0D3 744 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 POMKQ9H5K3 350 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 WDR55Q9H6Y2 383 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PRDM5Q9NQX1 630 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PLK2Q9NYY3 685 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SUCOQ9UBS9 1254 aaKnown RBP10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SARDHQ9UL12 918 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 SLC4A7Q9Y6M7 1214 aa10.09□□□□□ -0.79
TNFRSF11B-201ENST00000297350 IGLV3-10A0A075B6K4 115 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SMIM31A0A1B0GVY4 71 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRIM38O00635 465 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 SDHDO14521 159 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 AIM2O14862 343 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 OAZ2O95190 189 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 CYBAP13498 195 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 VCLP18206 1134 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 GRIK1P39086 918 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ABCG1P45844 678 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ALDH1A3P47895 512 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 TRAP1Q12931 704 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ITGA7Q13683 1181 aa10.08□□□□□ -0.8
TNFRSF11B-201ENST00000297350 ADGRE1Q14246 886 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms