RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 B3GNT5Q9BYG0 378 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 KATNBL1Q9H079 304 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 TREX1Q9NSU2 369 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 RIMKLBQ9ULI2 386 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 COPG1Q9Y678 874 aaKnown RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 PLXNA3P51805 1871 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 SMIM35A0A1B0GVV1 85 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 MBLAC1A4D2B0 266 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 EIF4E1BA6NMX2 242 aaKnown RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 WASH4PA8MWX3 477 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 E9PBE3 544 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 KLHL41O60662 606 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 TRMUO75648 421 aaKnown RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 VAPBO95292 243 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 PIGNO95427 931 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 IGLV3-25P01717 112 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 FGF4P08620 206 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 RBP1P09455 135 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 CDK4P11802 303 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 HSD17B1P14061 328 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 PAMP19021 973 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 MYF6P23409 242 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 TAF6P49848 677 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 EMP3P54852 163 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 NUP107P57740 925 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 MS4A2Q01362 244 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 BNIP2Q12982 314 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 USP4Q13107 963 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 ART3Q13508 389 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 KCTD2Q14681 263 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 MARCH8Q5T0T0 291 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 AFMIDQ63HM1 303 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 PID1Q7Z2X4 250 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 APPL2Q8NEU8 664 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 BHLHE22Q8NFJ8 381 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 SHKBP1Q8TBC3 707 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 GAB3Q8WWW8 586 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 POP5Q969H6 163 aaKnown RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 PBXIP1Q96AQ6 731 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 ZMAT2Q96NC0 199 aaKnown RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 PKP2Q99959 881 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 MAGEE1Q9HCI5 957 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 CSNK1G1Q9HCP0 422 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 ATP13A1Q9HD20 1204 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 SPAG4Q9NPE6 437 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 ENTPD7Q9NQZ7 604 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 TMEM9Q9P0T7 183 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 KLHL8Q9P2G9 620 aaPredicted RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
VCAM1-201ENST00000294728 ZDHHC2Q9UIJ5 367 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 AP4S1Q9Y587 144 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 NLRC5Q86WI3 1866 aa6.23□□□□□ -1.41
VCAM1-201ENST00000294728 MYO18AQ92614 2054 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 FGF10O15520 208 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 HNRNPRO43390 633 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 DLX3O60479 287 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 GPR32O75388 356 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MATN4O95460 622 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 NPPAP01160 153 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 LTFP02788 710 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 FCGR1AP12314 374 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 HOXB6P17509 224 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ERCC2P18074 760 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MPSTP25325 297 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 DPP6P42658 865 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CLCN5P51795 746 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PSME3P61289 254 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CCNA1P78396 465 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MPP1Q00013 466 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF792Q3KQV3 632 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 NHSL2Q5HYW2 709 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TSTD2Q5T7W7 516 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CMC1Q7Z7K0 106 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 PIGZQ86VD9 579 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF354CQ86Y25 554 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 BBS5Q8N3I7 341 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 FSTL5Q8N475 847 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MINDY1Q8N5J2 469 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 LEMD2Q8NC56 503 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 B3GALNT2Q8NCR0 500 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 SPPL2BQ8TCT7 592 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CALML6Q8TD86 181 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TFAP2CQ92754 450 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 RCN3Q96D15 328 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TSPAN17Q96FV3 270 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 UBXN10Q96LJ8 280 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 KLHL32Q96NJ5 620 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TRIM15Q9C019 465 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CYP4F11Q9HBI6 524 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 HMX1Q9NP08 348 aaPredicted RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 CACNA2D2Q9NY47 1150 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MYRFQ9Y2G1 1151 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 MIA3Q5JRA6 1907 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 LOC100653049A0A140TA62 436 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 KANSL1LA0AUZ9 987 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 HEATR9A2RTY3 570 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 TYW5A2RUC4 315 aaKnown RBP6.22□□□□□ -1.41
VCAM1-201ENST00000294728 VPS4BO75351 444 aa6.22□□□□□ -1.41
VCAM1-201ENST00000294728 KRT34O76011 436 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms