RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C18orf25Q96B23 403 aaPredicted RBP10.48□□□□□ -0.73
SKA1-201ENST00000285116 RCN3Q96D15 328 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 ASB9Q96DX5 294 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 SGF29Q96ES7 293 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 GPR78Q96P69 363 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CORO1BQ9BR76 489 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TMEM79Q9BSE2 394 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CXCL16Q9H2A7 254 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 HIPK3Q9H422 1215 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 WDR41Q9HAD4 459 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 CPA4Q9UI42 421 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 GJD2Q9UKL4 321 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 MYLKQ15746 1914 aa10.48□□□□□ -0.73
SKA1-201ENST00000285116 TRIM38O00635 465 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 FBP2O00757 339 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 CLASP2O75122 1294 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 SLC35E2BP0CK96 405 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ENO3P13929 434 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 PTPN1P18031 435 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 ERCC2P18074 760 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 LMO2P25791 158 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 HOXD12P35452 270 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 HALP42357 657 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 GALNT1Q10472 559 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 PPIL2Q13356 520 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 KIZQ2M2Z5 673 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 DCAF6Q58WW2 860 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ARL13AQ5H913 290 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 PPM1LQ5SGD2 360 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 KDM1BQ8NB78 822 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 DDHD1Q8NEL9 900 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 USP13Q92995 863 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 TSNARE1Q96NA8 513 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 LPIN3Q9BQK8 851 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PIGVQ9NUD9 493 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 TLK1Q9UKI8 766 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 TMED5Q9Y3A6 229 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 FADS3Q9Y5Q0 445 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 A0A087WXM4 84 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 A0A087X1B8 175 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 TCAF2A6NFQ2 919 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 M0QYT0 321 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 GABRDO14764 452 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 SPTLC1O15269 473 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 PIGNO95427 931 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 CHRNGP07510 517 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 OCM2P0CE71 109 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 OCMP0CE72 109 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 LRPAP1P30533 357 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 IREB2P48200 963 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 KPNA2P52292 529 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 SLC5A3P53794 718 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ILF2Q12905 390 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 ART3Q13508 389 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 MAPRE2Q15555 327 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ANKDD1AQ495B1 522 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 KCTD21Q4G0X4 260 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 RAB41Q5JT25 222 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PRAMEF19Q5SWL8 479 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 LRRC8EQ6NSJ5 796 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 CES3Q6UWW8 571 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PIWIL4Q7Z3Z4 852 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 CENPLQ8N0S6 344 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 SCML4Q8N228 414 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 C12orf43Q96C57 262 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 FTHL17Q9BXU8 183 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ANKRD60Q9BZ19 345 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PAIP1Q9H074 479 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 C20orf96Q9NUD7 363 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 SELENONQ9NZV5 590 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 SEPT10Q9P0V9 454 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 EBF1Q9UH73 591 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 AP4S1Q9Y587 144 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 HTR3EA5X5Y0 456 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 TRIM64CA6NLI5 447 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 FAM155AB1AL88 458 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 H3BRB1 525 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 AOC2O75106 756 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 RECQL4O94761 1208 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 F9P00740 461 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 FYNP06241 537 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 HTR7P34969 479 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 BCAP31P51572 246 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 ZNF157P51786 506 aaPredicted RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 ITGA7Q13683 1181 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PRPSAP1Q14558 356 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 GRM3Q14832 879 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 IL23RQ5VWK5 629 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 DCDC5Q6ZRR9 648 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 PAQR9Q6ZVX9 377 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 GALNT7Q86SF2 657 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 RNF148Q8N7C7 305 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 GRIN3AQ8TCU5 1115 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 THAP11Q96EK4 314 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 MFSD3Q96ES6 412 aa10.47□□□□□ -0.73
SKA1-201ENST00000285116 TUT1Q9H6E5 874 aaKnown RBP10.47□□□□□ -0.73
SKA1-201ENST00000285116 CNGB3Q9NQW8 809 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms