RNA–Protein interactions for RNA: ENST00000224073.5

EDF1-201, Transcript of endothelial differentiation related factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDF1, Length 640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-201ENST00000224073 C1QTNF2Q9BXJ5 285 aa12.84□□□□□ -0.35
EDF1-201ENST00000224073 ISCUQ9H1K1 167 aa12.84□□□□□ -0.35
EDF1-201ENST00000224073 TCEAL2Q9H3H9 227 aaPredicted RBP12.84□□□□□ -0.35
EDF1-201ENST00000224073 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
EDF1-201ENST00000224073 MBNL1Q9NR56 388 aaKnown RBP12.84□□□□□ -0.35
EDF1-201ENST00000224073 IPO11Q9UI26 975 aaKnown RBP12.84□□□□□ -0.35
EDF1-201ENST00000224073 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
EDF1-201ENST00000224073 TPX2Q9ULW0 747 aaKnown RBP12.84□□□□□ -0.35
EDF1-201ENST00000224073 APC2O95996 2303 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 TRABD2BA6NFA1 517 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 ZSCAN5CA6NGD5 496 aaPredicted RBP12.83□□□□□ -0.36
EDF1-201ENST00000224073 MUSKO15146 869 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 TSPAN6O43657 245 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 MAGEC1O60732 1142 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 PALMO75781 387 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 GYPCP04921 128 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 XPAP23025 273 aaPredicted RBP12.83□□□□□ -0.36
EDF1-201ENST00000224073 CASP14P31944 242 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 SSR1P43307 286 aaKnown RBP12.83□□□□□ -0.36
EDF1-201ENST00000224073 AIF1P55008 147 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 CYP4F3Q08477 520 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 OVGP1Q12889 678 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 INO80DQ53TQ3 878 aaPredicted RBP12.83□□□□□ -0.36
EDF1-201ENST00000224073 FAM182AQ5T1J6 154 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 RBFAQ8N0V3 343 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 LRRN4Q8WUT4 740 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 NUP85Q9BW27 656 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 XPO4Q9C0E2 1151 aaKnown RBP12.83□□□□□ -0.36
EDF1-201ENST00000224073 RETREG1Q9H6L5 497 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 SP110Q9HB58 689 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.83□□□□□ -0.36
EDF1-201ENST00000224073 KLHL11Q9NVR0 708 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 PNMA8BQ9ULN7 279 aaPredicted RBP12.83□□□□□ -0.36
EDF1-201ENST00000224073 SCINQ9Y6U3 715 aa12.83□□□□□ -0.36
EDF1-201ENST00000224073 ARHGAP42A6NI28 874 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 FPGTO14772 594 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 AREL1O15033 823 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 YKT6O15498 198 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 AP1G1O43747 822 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 RFPL3O75679 317 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 PIAS2O75928 621 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 CAPNS1P04632 268 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 SERPING1P05155 500 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 RARAP10276 462 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 JUPP14923 745 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 IGFALSP35858 605 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 NDST2P52849 883 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 ZBED6P86452 979 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 DAB2P98082 770 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 RAD51Q06609 339 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 C1orf61Q13536 156 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 DPYSQ14117 519 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 SMAD1Q15797 465 aaKnown RBP12.82□□□□□ -0.36
EDF1-201ENST00000224073 PROX2Q3B8N5 592 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 FIGNQ5HY92 759 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 CCDC122Q5T0U0 273 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 HES3Q5TGS1 186 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 AFMIDQ63HM1 303 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 PPP1R2P3Q6NXS1 205 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 KYAT3Q6YP21 454 aaKnown RBP12.82□□□□□ -0.36
EDF1-201ENST00000224073 OXR1Q8N573 874 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.82□□□□□ -0.36
EDF1-201ENST00000224073 PAF1Q8N7H5 531 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 CXorf40AQ8TE69 158 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 TSC1Q92574 1164 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 LRIG1Q96JA1 1093 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 CINPQ9BW66 212 aaPredicted RBP12.82□□□□□ -0.36
EDF1-201ENST00000224073 OSBPL1AQ9BXW6 950 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 PACSIN1Q9BY11 444 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 EDEM3Q9BZQ6 932 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
EDF1-201ENST00000224073 PCDH12Q9NPG4 1184 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 ANAPC7Q9UJX3 599 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 CAPN11Q9UMQ6 739 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 RAXQ9Y2V3 346 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
EDF1-201ENST00000224073 HS3ST3A1Q9Y663 406 aa12.82□□□□□ -0.36
EDF1-201ENST00000224073 SPTY2D1-AS1A0A0U1RR47 76 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 A0A1W2PQJ5 194 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 TMEM8BA6NDV4 472 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 CASC3O15234 703 aaKnown RBP12.81□□□□□ -0.36
EDF1-201ENST00000224073 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 CD48P09326 243 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 GIMD1P0DJR0 217 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 MYBL1P10243 752 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 CKMT2P17540 419 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 EIF4A3P38919 411 aaKnown RBP12.81□□□□□ -0.36
EDF1-201ENST00000224073 SCNN1BP51168 640 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 SLC10A7Q0GE19 358 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 EIF2B5Q13144 721 aaKnown RBP12.81□□□□□ -0.36
EDF1-201ENST00000224073 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.36
EDF1-201ENST00000224073 MMRN1Q13201 1228 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 CAMK2BQ13554 666 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 PTPRRQ15256 657 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 IRF4Q15306 451 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 DEFB133Q30KQ1 61 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 ATP13A4Q4VNC1 1196 aa12.81□□□□□ -0.36
EDF1-201ENST00000224073 CRTC1Q6UUV9 634 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms