RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 CFLARO15519 480 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 PSMD3O43242 534 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 STAMBPO95630 424 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 CHRNGP07510 517 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 GOT1P17174 413 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 ACLYP53396 1101 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 BCAT1P54687 386 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 AIF1P55008 147 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 BST2Q10589 180 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 SLC12A1Q13621 1099 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 INTS11Q5TA45 600 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 IL23RQ5VWK5 629 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 FAM45BPQ6NSW5 357 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 DPH6Q7L8W6 267 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 GPR141Q7Z602 305 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 SCUBE3Q8IX30 993 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 CACTIN-AS1Q8N1I8 211 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 ZBTB8BQ8NAP8 495 aaPredicted RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 FAM45AQ8TCE6 357 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 HSFY1Q96LI6 401 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 LGMNQ99538 433 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 TMEM79Q9BSE2 394 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 HMX1Q9NP08 348 aaPredicted RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 PALMDQ9NP74 551 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 ARMC1Q9NVT9 282 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 TRHDEQ9UKU6 1024 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 PTCH2Q9Y6C5 1203 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 NEMP1O14524 444 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 HSPA8P11142 646 aaKnown RBP16.08■□□□□ 0.16
SF3A2-201ENST00000221494 ZBTB17Q13105 803 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 SPATS1Q496A3 300 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 SAMD4BQ5PRF9 694 aaKnown RBP16.08■□□□□ 0.16
SF3A2-201ENST00000221494 KCNMB4Q86W47 210 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 VAT1Q99536 393 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 TASP1Q9H6P5 420 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 SPAG4Q9NPE6 437 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 ITGB1BP2Q9UKP3 347 aa16.08■□□□□ 0.16
SF3A2-201ENST00000221494 PIN4Q9Y237 131 aaKnown RBP16.08■□□□□ 0.16
SF3A2-201ENST00000221494 CHRNA1P02708 482 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 HMOX2P30519 316 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 MATKP42679 507 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ATP4BP51164 291 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 IRF9Q00978 393 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ITGA7Q13683 1181 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CYTH1Q15438 398 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 SLC25A52Q3SY17 297 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 UBXN11Q5T124 520 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ITPRIPL1Q6GPH6 555 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 LSMEM2Q8N112 164 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 FIBCD1Q8N539 461 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CCDC185Q8N715 623 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 KDM1BQ8NB78 822 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 RNF139Q8WU17 664 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 USP13Q92995 863 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ZUFSPQ96AP4 578 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CNDP2Q96KP4 475 aaKnown RBP16.07■□□□□ 0.16
SF3A2-201ENST00000221494 HIPK3Q9H422 1215 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 SNTG2Q9NY99 539 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ZDHHC2Q9UIJ5 367 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 TRIM17Q9Y577 477 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 SDHDO14521 159 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 HTRA2O43464 458 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-201ENST00000221494 GABBR2O75899 941 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ZNF12P17014 697 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 LRP8Q14114 963 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 DUS1LQ6P1R4 473 aaKnown RBP16.07■□□□□ 0.16
SF3A2-201ENST00000221494 GPR180Q86V85 440 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ZNF354CQ86Y25 554 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 TMEM130Q8N3G9 435 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 LZTR1Q8N653 840 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 OR52K1Q8NGK4 314 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 LRRN4Q8WUT4 740 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 BORCS5Q969J3 196 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ATP6V1E2Q96A05 226 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CCDC126Q96EE4 140 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 DOK1Q99704 481 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 TRIM15Q9C019 465 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CXCL16Q9H2A7 254 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 PLEKHA5Q9HAU0 1116 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 ADA2Q9NZK5 511 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 NCKIPSDQ9NZQ3 722 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 CD300AQ9UGN4 299 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 HES2Q9Y543 173 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 TRPV2Q9Y5S1 764 aa16.07■□□□□ 0.16
SF3A2-201ENST00000221494 DAB1O75553 588 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 SBK3P0C264 359 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 PTPN1P18031 435 aaKnown RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 ZNF135P52742 658 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 MGAT3Q09327 533 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 NHSL2Q5HYW2 709 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 BSPRYQ5W0U4 402 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 NXNQ6DKJ4 435 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 LRRC8EQ6NSJ5 796 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 C8orf82Q6P1X6 216 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-201ENST00000221494 PID1Q7Z2X4 250 aa16.06■□□□□ 0.16
SF3A2-201ENST00000221494 BNIPLQ7Z465 357 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms