RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PPHLN1Q8NEY8 458 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FIBINQ8TAL6 211 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SERAC1Q96JX3 654 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 KLF6Q99612 283 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 LMAN2Q12907 356 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 BMPR2Q13873 1038 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 RAB30Q15771 203 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TTC31Q49AM3 519 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 INO80DQ53TQ3 878 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 HSP90AA5PQ58FG0 334 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SIRPB2Q5JXA9 342 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 LGSNQ5TDP6 509 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 GDAP1Q8TB36 358 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ITFG1Q8TB96 612 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SLC28A3Q9HAS3 691 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MRM3Q9HC36 420 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PRKAG3Q9UGI9 489 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 DOCK8Q8NF50 2099 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PAPLNO95428 1278 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MT-ND3P03897 115 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CYBBP04839 570 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ADRA1DP25100 572 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CDK18Q07002 472 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 USP4Q13107 963 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ITIH4Q14624 930 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 COL13A1Q5TAT6 717 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PACS1Q6VY07 963 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SH2D5Q6ZV89 423 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TAX1BP1Q86VP1 789 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 KCNMB4Q86W47 210 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TMEM25Q86YD3 366 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 RNF135Q8IUD6 432 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FEM1CQ96JP0 617 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 C2orf49Q9BVC5 232 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SSU72Q9NP77 194 aaKnown RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SMG5Q9UPR3 1016 aaKnown RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 INSIG1O15503 277 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MT-CO1P00395 513 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 EPOP01588 193 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CD70P32970 193 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SERPINB9P50453 376 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SLC18A1P54219 525 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SLC14A2Q15849 920 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 LACTB2Q53H82 288 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MROH9Q5TGP6 573 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 IFT43Q96FT9 208 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 AGAP2Q99490 1192 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TREX1Q9NSU2 369 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 C20orf96Q9NUD7 363 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FGFR1OP2Q9NVK5 253 aa19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 KIAA1522Q9P206 1035 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SNX3O60493 162 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CA4P22748 312 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 RPA3P35244 121 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TEDDM1Q5T9Z0 273 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FBXW10Q5XX13 1052 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ESRP1Q6NXG1 681 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 BANPQ8N9N5 519 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ACDQ96AP0 544 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MTBPQ96DY7 904 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TRIB3Q96RU7 358 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 LINC00597Q9H2U6 94 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SLC2A6Q9UGQ3 507 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 BRWD1Q9NSI6 2320 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CCT8L1PA6NM43 557 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 GOLGA8TH3BQL2 631 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TCF3P15923 654 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 HLA-DPA1P20036 260 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 HLA-FP30511 346 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 WDR4P57081 412 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SEPT6Q14141 434 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PLEKHG6Q3KR16 790 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 DENND1AQ8TEH3 1009 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ATP2A3Q93084 1043 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ALKBH8Q96BT7 664 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 NUDCD1Q96RS6 583 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 RANBP9Q96S59 729 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CPNE1Q99829 537 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 NSRP1Q9H0G5 558 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 KDM4CQ9H3R0 1056 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SFXN1Q9H9B4 322 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SCUBE2Q9NQ36 999 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 NKIRAS1Q9NYS0 192 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 LHX3Q9UBR4 397 aa19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 INTS6Q9UL03 887 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FCF1Q9Y324 198 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-201ENST00000162749 HEATR9A2RTY3 570 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 RFPL1O75677 317 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PENKP01210 267 aaPredicted RBP19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FGF1P05230 155 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PYGBP11216 843 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CNTFP26441 200 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ARNTP27540 789 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 GBP2P32456 591 aaPredicted RBP19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 GALNT3Q14435 633 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 CNGA3Q16281 694 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ARMC3Q5W041 872 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PDPK2PQ6A1A2 396 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ANKS4BQ8N8V4 417 aa19.85■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SGSM3Q96HU1 749 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms