RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Xlr4aA2BI40 215 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 TagapB2RWW0 714 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Itgb3O54890 787 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Itga4Q00651 1039 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Cdk16Q04735 496 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Chrna5Q2MKA5 467 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Ubxn7Q6P5G6 467 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Arl5aQ80ZU0 179 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 C8aQ8K182 587 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Olfr589Q8VGV8 317 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Asb15Q8VHS6 583 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Tfap2dQ91ZK0 452 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Trappc5Q9CQA1 188 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Cacna1fQ9JIS7 1985 aa9.4□□□□□ -0.9
Col6a5-201ENSMUST00000165165 Slc6a21A0A1B0GSD2 748 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Nme9A0A1L1SUL6 329 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fam43bA2AM80 330 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Olfr1200A2ATJ4 336 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cd4P06332 457 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 OcmP51879 109 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 B3gat3P58158 335 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cdk7Q03147 346 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Glt6d1Q2NKH9 311 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Tmem35bQ3U0Y2 150 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ntrk3Q6VNS1 825 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Peg10Q7TN75 958 aaKnown RBP9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Mtmr4Q91XS1 1190 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Grhl1Q921D9 618 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gprc5bQ923Z0 410 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ifi44lQ9BDB7 447 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Spg21Q9CQC8 308 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gabra4Q9D6F4 552 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 H2afb2S4R1M3 115 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Med14A2ABV5 1459 aaKnown RBP9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Col1a2Q01149 1372 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Phb2O35129 299 aaKnown RBP9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Frg1P97376 258 aaKnown RBP9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rmdn3Q3UJU9 470 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Trappc3lQ4KL14 181 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 ArhgdibQ61599 200 aaKnown RBP9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 AY358078Q6UY53 465 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cyp2r1Q6VVW9 501 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Kct2Q8K201 259 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Pop1Q8K205 1045 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Acvr1cQ8K348 493 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Mcoln3Q8R4F0 553 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rsph14Q9D3W1 341 aa9.4□□□□□ -0.91
Col6a5-201ENSMUST00000165165 A0A286YCQ8 80 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Zfp563B8JJZ9 448 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc6a2O55192 617 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ulk1O70405 1051 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Pgk1P09411 417 aaKnown RBP9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Polr2lP62876 67 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Adra1dP97714 562 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Entpd7Q3TCT4 606 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Proser1Q5PRE5 913 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Psd2Q6P1I6 770 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 SgshQ9EQ08 502 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Vmn2r118E9Q1C1 853 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gm11397F6V5V4 377 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gm6356L7N2A7 188 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rpl3P27659 403 aaKnown RBP9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cdk4P30285 303 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Fdft1P53798 416 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Shroom1Q5SX79 823 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Serpinb9fQ80UK5 377 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Vcpip1Q8CDG3 1220 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Acad9Q8JZN5 625 aaKnown RBP9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Serpinb9gQ8VHQ1 377 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Pih1d1Q9CQJ2 290 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Snrnp48Q9D361 337 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Cdk12Q14AX6 1484 aaKnown RBP9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc6a16A0A1L1SR47 742 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Zfand4D3Z3C6 739 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Aars2Q14CH7 980 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rars2Q3U186 578 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Gm156Q58A37 223 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Txndc8Q69AB2 127 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc39a4Q78IQ7 660 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Syt16Q7TN83 639 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 B3gnt7Q8K0J2 397 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Wrap53Q8VC51 532 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Olfr1052Q8VGR8 312 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Camk2gQ923T9 529 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 AasdhpptQ9CQF6 309 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Mau2Q9D2X5 619 aaKnown RBP9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Trpm5Q9JJH7 1158 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rab25Q9WTL2 213 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Wscd2D4PHA7 571 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc22a8O88909 537 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Slc2a2P14246 523 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 LipeP54310 759 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Mapkapk3Q3UMW7 384 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Efcab3Q80X60 432 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 SgtaQ8BJU0 315 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Pskh1Q91YA2 424 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Rnaseh2aQ9CWY8 301 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Ptch1Q61115 1434 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Arl16B1ATY8 173 aa9.39□□□□□ -0.91
Col6a5-201ENSMUST00000165165 Vmn2r104E9Q2J5 860 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms