RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Nudt18Q3U2V3 323 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Slfn4Q3UV66 602 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Clhc1Q5M6W3 596 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nr1h2Q60644 446 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Clic5Q8BXK9 251 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Kctd2Q8CEZ0 266 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Lrrc40Q9CRC8 602 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ccr10Q9JL21 362 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cfap44E9Q5M6 1843 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm21083A0A0G2JFD5 256 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Speer4eK7N6S8 255 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ptpn9O35239 593 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Apoa1Q00623 264 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Zmym5Q3U2E2 627 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 PterQ60866 349 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Grik1Q60934 836 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Fam126aQ6P9N1 521 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Znf569Q80W31 679 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Plekha8Q80W71 519 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Lrrc27Q80YS5 523 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mta1Q8K4B0 715 aaKnown RBP15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 CtbsQ8R242 366 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Lpin1Q91ZP3 924 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ppp1r16aQ923M0 524 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Fam3aQ9D8T0 230 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Adamts6D3Z1A5 1117 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Alas2P08680 587 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 HdcP23738 662 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cdh6P97326 790 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Atp11bQ6DFW5 1175 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Zfp759Q7M6X3 721 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 NfascQ810U3 1240 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 TufmQ8BFR5 452 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Arhgef33Q8BW86 850 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Camkk2Q8C078 588 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nle1Q8VEJ4 485 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Pcdha6Q91Y14 946 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 RerglB2RVE2 204 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Olfr731F8VQB9 326 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm17535J3KMR8 224 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Hs3st1O35310 311 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Igf2bp1O88477 577 aaKnown RBP15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rplp2P99027 115 aaKnown RBP15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Q3UTZ3 580 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 EfsQ64355 560 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nup107Q8BH74 926 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 HadhaQ8BMS1 763 aaKnown RBP15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Abi3Q8BYZ1 367 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Rdh13Q8CEE7 334 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Pphln1Q8K2H1 381 aaKnown RBP15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Armcx6Q8K3A6 301 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Olfr1414Q8VGU5 312 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mpp5Q9JLB2 675 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ak1Q9R0Y5 194 aa15.67■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 MrasO08989 208 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tpst1O70281 370 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 RxraP28700 467 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 PrkciQ62074 595 aaKnown RBP15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nlrp9cQ66X01 1004 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Smndc1Q8BGT7 238 aaKnown RBP15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mfsd14bQ8CIA9 507 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 HnrnplQ8R081 586 aaKnown RBP15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Spns2Q91VM4 549 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tada1Q99LM9 335 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Aldoart1A6ZI46 419 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm8267E9Q207 261 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Calhm3J3QMI4 347 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tbx1P70323 479 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Pcnx4Q3UVY5 1174 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Arrdc3Q7TPQ9 414 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mettl21cQ8BLU2 248 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Thop1Q8C1A5 687 aaKnown RBP15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Uroc1Q8VC12 676 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gprc5bQ923Z0 410 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 B4galt4Q9JJ04 344 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Tnrc6cQ3UHC0 1690 aaKnown RBP15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nipsnap3aB1AWZ3 247 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Kifc5bE9PUA5 672 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Angpt2O35608 496 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Arnt2Q61324 712 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 RfflQ6ZQM0 377 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mapk15Q80Y86 549 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 NaprtQ8CC86 538 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 NclnQ8VCM8 563 aaKnown RBP15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Znf622Q91VY9 476 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ggt7Q99JP7 662 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cab39lQ9DB16 337 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Cacng4Q9JJV4 327 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gdpd5Q640M6 607 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nr6a1Q64249 495 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Nqo1Q64669 274 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Trnp1Q80ZI1 223 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Mapkap1Q8BKH7 522 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ahi1Q8K3E5 1047 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Ccdc81Q9D5W4 654 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 P2yr13Q9D8I2 337 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Oxct2bQ9ESL0 520 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Oxct2aQ9JJN4 520 aa15.66■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 Gm3264L7N2C5 238 aa15.65■□□□□ 0.1
Ccdc88b-201ENSMUST00000113440 C1dO35473 141 aa15.65■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms