RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ccdc40Q8BI79 1192 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nup93Q8BJ71 819 aaKnown RBP10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tram1l1Q8QZR0 363 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 GrpQ8R1I2 146 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Impg1Q8R1W8 798 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rps6kl1Q8R2S1 544 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr665Q8VG79 316 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Smc6Q924W5 1097 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PdiltQ9DAN1 588 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 CpqQ9WVJ3 470 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mtm1Q9Z2C5 603 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 F8Q06194 2319 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Glyatl3E9Q5L8 290 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sypl1O09117 261 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Scamp3O35609 349 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 NmbrO54799 390 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Eno1P17182 434 aaKnown RBP10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pdha1P35486 390 aaKnown RBP10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Bcl6P41183 707 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gpr65Q61038 337 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Inpp4bQ6P1Y8 924 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Kcnk12Q76M80 430 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tecpr1Q80VP0 1166 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Insig1Q8BGI3 259 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gpr20Q8BYC4 358 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Sh3kbp1Q8R550 709 aaKnown RBP10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cyp2c70Q91W64 489 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Syt12Q920N7 421 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Retreg3Q9CQV4 466 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 XpotQ9CRT8 963 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vmn1r49Q9WUF1 310 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Aldh18a1Q9Z110 795 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp780bE9Q2S6 806 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gm4847G3X946 537 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ncf2O70145 525 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 P01641 117 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 HdcP23738 662 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 FasP25446 327 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tnfrsf4P47741 272 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Itga7Q61738 1179 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Disc1Q811T9 852 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tbc1d17Q8BYH7 645 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lrrc4cQ8C031 640 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Atat1Q8K341 421 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Glcci1Q8K3I9 537 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 PolbQ8K409 335 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Emid1Q91VF5 444 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mrps33Q9D2R8 106 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tchhl1Q9D3P1 638 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tk2Q9R088 270 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Kif9Q9WV04 790 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rev3lQ61493 3122 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Col6a3E9PWQ3 3284 aa10.04□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vwa5b1A9Z1V5 1215 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fam46dB1ATX6 390 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 VegfcP97953 415 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Bcl2l1Q64373 233 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nlrp4fQ66X05 959 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Maml1Q6T264 1020 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Timm29Q8BGX2 266 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cox14Q8BH51 57 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Q8C1R3 189 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ccdc187Q8C5V8 958 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Acad10Q8K370 1069 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vps37bQ8R0J7 285 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zdhhc7Q91WU6 308 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Spata9Q9D9R3 252 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Dhx35A2ACQ1 703 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Bfsp1A2AMT1 669 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Armt1A6H630 439 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Pik3cdO35904 1043 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 F9P16294 471 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Cnr2P47936 347 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nt5dc3Q3UHB1 546 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ehbp1Q69ZW3 1231 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Adipor2Q8BQS5 386 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tmem82Q8R115 356 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Vmn1r214Q8R279 367 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Imp4Q8VHZ7 291 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Nxnl2Q9D531 156 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Krt71Q9R0H5 524 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 MgamB5THE2 1827 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Shroom3Q9QXN0 1986 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Card9A2AIV8 536 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 DldO08749 509 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gp1baO35930 734 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Hspa9P38647 679 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Gdi1P50396 447 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Hsd17b4P51660 735 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Snrpd1P62315 119 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 StacP97306 403 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Tmem184cQ3TPR7 525 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Lmf1Q3U3R4 574 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Olfr667Q7TRP4 326 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Rbm12b1Q80YR9 836 aaKnown RBP10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Fzd10Q8BKG4 582 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Mterf2Q8BKY8 385 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 SheQ8BSD5 492 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Ppfia2Q8BSS9 1257 aa10.03□□□□□ -0.8
Ccdc38-201ENSMUST00000092215 Zfp263Q8CF60 680 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 55.2 ms