RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Atad3Q925I1 591 aa7.65□□□□□ -1.18
Trim40-201ENSMUST00000087158 Pramel1Q99MW3 458 aa7.65□□□□□ -1.18
Trim40-201ENSMUST00000087158 Scn5aQ9JJV9 2019 aa7.65□□□□□ -1.18
Trim40-201ENSMUST00000087158 Tmem115Q9WUH1 350 aa7.65□□□□□ -1.18
Trim40-201ENSMUST00000087158 Olfr1049A2ARZ0 308 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 2310061I04RikB8JJ69 315 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 KlO35082 1014 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 CblP22682 913 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Mapkapk2P49138 386 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 S100bP50114 92 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 SqleP52019 572 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Nudt1P53368 156 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Lman2lP59481 347 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Caprin2Q05A80 1031 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Arhgap45Q3TBD2 1116 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Prss36Q5K2P8 849 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Mfsd3Q5U419 412 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Arl13bQ640N2 427 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Htr1aQ64264 421 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Capn3Q64691 821 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Ppp1r26Q6A025 1163 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Ssxb5Q6XAS2 159 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Efr3bQ6ZQ18 817 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Fastkd5Q7TMV3 762 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Rpp38Q80UU2 280 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Arhgap25Q8BYW1 648 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Nlrp10Q8CCN1 673 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Lrif1Q8CDD9 755 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Q8CDN1 933 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Snx30Q8CE50 437 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Gbp5Q8CFB4 590 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Ppp4r1Q8K2V1 951 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Ddx18Q8K363 660 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Vmn1r188Q8K3N2 308 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Gtse1Q8R080 741 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Rps6kl1Q8R2S1 544 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Brd8Q8R3B7 951 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 TgdsQ8VDR7 355 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 AadacQ99PG0 398 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Cpxm2Q9D2L5 764 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Tomm20lQ9D4V6 152 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Trpc4Q9QUQ5 974 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Nphs1Q9QZS7 1256 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Chrna6Q9R0W9 494 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 GghQ9Z0L8 317 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Col4a6B1AVK5 1691 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Kntc1Q8C3Y4 2207 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Olfr414E9Q5P8 317 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Gm5689F6Y2A6 97 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Pik3cdO35904 1043 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Syngr1O55100 234 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Eef1bO70251 225 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 AcrP23578 436 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Gja8P28236 440 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Gsta3P30115 221 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Pdha1P35486 390 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Aff3P51827 1254 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Itga4Q00651 1039 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Uba1Q02053 1058 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Samd11Q1RNF8 542 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Snx21Q3UR97 363 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Fam189bQ5HZJ5 669 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 PapolaQ61183 739 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 CcncQ62447 283 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Atp2a3Q64518 1038 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Exoc3l4Q6DIA2 721 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Lingo3Q6GQU6 589 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Olfr1505Q7TQQ2 316 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Vtcn1Q7TSP5 283 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Dnajc6Q80TZ3 938 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Crb2Q80YA8 1282 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Pcid2Q8BFV2 399 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Q8BGA7 448 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Tusc3Q8BTV1 347 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Lrch3Q8BVU0 778 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Pdcd2lQ8C5N5 364 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Aph1bQ8C7N7 257 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Ftsj1Q8CBC7 324 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 RhoqQ8R527 205 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Pglyrp2Q8VCS0 530 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Dhx36Q8VHK9 1001 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Oas1dQ8VI95 361 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Tcaf2Q921K8 919 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Arl8bQ9CQW2 186 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Anks3Q9CZK6 655 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Fam90a1bQ9D4F3 419 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Sun1Q9D666 913 aaKnown RBP7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 PgcQ9D7R7 392 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Il1rl2Q9ERS7 574 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Dclre1aQ9JIC3 1026 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Actl7bQ9QY83 418 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Dnajb2Q9QYI5 324 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Ror2Q9Z138 944 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Mtm1Q9Z2C5 603 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Rp1P56716 2095 aa7.64□□□□□ -1.19
Trim40-201ENSMUST00000087158 Shroom3Q9QXN0 1986 aa7.63□□□□□ -1.19
Trim40-201ENSMUST00000087158 Dhx35A2ACQ1 703 aaKnown RBP7.63□□□□□ -1.19
Trim40-201ENSMUST00000087158 Nhsl2B1AXH1 854 aa7.63□□□□□ -1.19
Trim40-201ENSMUST00000087158 Gm3259D3YUK0 475 aa7.63□□□□□ -1.19
Trim40-201ENSMUST00000087158 Zc3h7aE9PWW6 970 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms