RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Grm6Q5NCH9 871 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1364Q5SZS9 314 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dnajc11Q5U458 559 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 SlaQ60898 281 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rmnd5aQ80YQ8 391 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Atp6v1hQ8BVE3 483 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ppm1kQ8BXN7 372 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Unc45bQ8CGY6 931 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 SdsQ8VBT2 327 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Reep2Q8VCD6 254 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam110cQ8VE94 421 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Hkdc1Q91W97 915 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 AdprmQ99KS6 340 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam111aQ9D2L9 613 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam174aQ9D3L0 190 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Wdr64Q9D565 1086 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Natd1Q9DBW3 110 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lgi1Q9JIA1 557 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sh3glb1Q9JK48 365 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Smok1Q9QYZ4 484 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 PignQ9R1S3 931 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lactbl1S4R213 581 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Stpg3A2RSX4 306 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zfp395E9Q5N9 508 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zfp715G3X9T1 886 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Kcnk3O35111 409 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 EdaO54693 391 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Klc1O88447 541 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 ArP19091 899 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ms4a2P20490 235 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tbxa2rP30987 341 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cst8P32766 142 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Bcl6P41183 707 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Igfbp1P47876 272 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ptprn2P80560 1001 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mrpl10Q3TBW2 262 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam98aQ3TJZ6 515 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Bahd1Q497V6 772 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lhfpl4Q5U4E0 247 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Glt8d2Q640P4 349 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 GartQ64737 1010 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 FAM120AQ6A0A9 1112 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mon1aQ6PDG8 556 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Znf592Q8BHZ4 1262 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Smyd4Q8BTK5 799 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc15a5Q8CBB2 566 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cfap61Q8CEL2 1252 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 BicralQ8CHH5 1074 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc47a1Q8K0H1 567 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Exoc6Q8R313 802 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Med17Q8VCD5 649 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Stx18Q8VDS8 334 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zbtb1Q91VL9 713 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lpin1Q91ZP3 924 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Col25a1Q99MQ5 666 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 OoepQ9CWE6 164 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rgs19Q9CX84 216 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Bbs5Q9CZQ9 341 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Atad1Q9D5T0 361 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dnajb4Q9D832 337 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sgf29Q9DA08 293 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ndel1Q9ERR1 345 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Jam2Q9JI59 298 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cyp2g1Q9WV19 494 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tmem29A2ANF5 204 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tcte1A6H639 498 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1471F6QVZ8 314 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm8374L7N2A9 172 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 TyrP11344 533 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 RargP18911 458 aaKnown RBP9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Capza2P47754 286 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Eif2ak2Q03963 515 aaKnown RBP9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Dact3Q0PHV7 610 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Plekha7Q3UIL6 1118 aaKnown RBP9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Npy4rQ61041 375 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Oxgr1Q6IYF8 337 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Styk1Q6J9G1 429 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc46a1Q6PEM8 459 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Il20raQ6PHB0 546 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zfyve28Q6ZPK7 905 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Chst9Q76EC5 413 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cd3eapQ76KJ5 399 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sdccag8Q80UF4 717 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trim6Q8BGE7 488 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc15a3Q8BPX9 578 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Chst8Q8BQ86 417 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tmem67Q8BR76 992 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Palm2Q8BR92 376 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Acsl5Q8JZR0 683 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Unc5bQ8K1S3 945 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ppp4r1Q8K2V1 951 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lars2Q8VDC0 902 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cbx7Q8VDS3 158 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Grk5Q8VEB1 590 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ciapin1Q8WTY4 309 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ces1fQ91WU0 561 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Prmt7Q922X9 692 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 DdoQ922Z0 341 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ms4a6bQ99N09 244 aa9.16□□□□□ -0.94
Upf3b-201ENSMUST00000076265 AacsQ9D2R0 672 aa9.16□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms