RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 GabreA2AMW3 916 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 A930018M24RikB7ZMY3 218 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 S100zB9EJL3 99 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Il12bP43432 335 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PtpaP58389 323 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Clhc1Q5M6W3 596 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Wbp4Q61048 376 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Atg16l2Q6KAU8 623 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slitrk2Q810C0 846 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Bdh2Q8JZV9 245 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 HpgdQ8VCC1 269 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 NclnQ8VCM8 563 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Adcy4Q91WF3 1077 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Txndc9Q9CQ79 226 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Actl7bQ9QY83 418 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ern2Q9Z2E3 911 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Znf638Q61464 1960 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ism2D3Z6A3 493 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Azin1O35484 448 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 UtyP79457 1212 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Prdx5P99029 210 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Q32M26 199 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Arhgef9Q3UTH8 516 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmem65Q4VAE3 234 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Trpm4Q7TN37 1213 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mcph1Q7TT79 822 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 GmppbQ8BTZ7 360 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Lrrc19Q8BZT5 364 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Acsl5Q8JZR0 683 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Snapc1Q8K0S9 389 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr697Q8VFM4 317 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Sdcbp2Q99JZ0 292 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tma16Q9CR02 221 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Prl7c1Q9CRB5 251 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Anks3Q9CZK6 655 aa10.38□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cyp2b13A6H6J2 491 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Catsperg2C6KI89 1145 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm17093F6XGJ4 214 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Sox6P40645 827 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gata5P97489 404 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mageb5Q14AN0 366 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Trappc9Q3U0M1 1148 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 LcorlQ3U285 600 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Serpina3gQ5I2A0 440 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 CcncQ62447 283 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmem130Q6NXM3 419 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 RbfaQ6P3B9 350 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 MslnlQ8C160 685 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Wdr47Q8CGF6 920 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr1467Q8VFW1 308 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr348Q8VGK3 313 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Olfr1414Q8VGU5 312 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Abtb1Q99LJ2 478 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmbim4Q9DA39 238 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pkd2l1A2A259 760 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 4931406B18RikA2RSL7 367 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ildr2B5TVM2 661 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Trim15G3UY57 292 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 CenpaO35216 134 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fdft1P53798 416 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Snrpd1P62315 119 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Smpdl3aP70158 445 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Zbtb2Q3V3W4 514 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mkrn3Q60764 544 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Has1Q61647 583 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Inpp4bQ6P1Y8 924 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pramel7Q810Y8 479 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rbms3Q8BWL5 431 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 MafaQ8CF90 359 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 SarafQ8R3Q0 334 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mrps2Q924T2 291 aaKnown RBP10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tada1Q99LM9 335 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mtfr1Q99MB2 328 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Trpc4apQ9JLV2 797 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm3147A0A0J9YU88 481 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm10424A0A0J9YVD0 481 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Rnf19bA2A7Q9 732 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ssxb8B1AY40 170 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm10477F6SW83 55 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Vmn1r39G3UWE6 305 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gm7971J3QMM8 481 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Ikzf3O08900 507 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dnase1l3O55070 310 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mtnd2P03893 345 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hpcal1P62748 193 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Stard3Q61542 446 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fnip1Q68FD7 1165 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmc7Q8C428 726 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Gsdmc3Q8CB12 480 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Glis1Q8K1M4 789 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Fis1Q9CQ92 152 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Spg21Q9CQC8 308 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 DgkeQ9R1C6 564 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 NbnQ9R207 751 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Acp4D3YTS9 425 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 AprtP08030 180 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tap1P21958 724 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Pqlc1Q80XM9 271 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Dnajc14Q921R4 703 aa10.37□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Q99KU6 348 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms