RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Ephx2P34914 554 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Pdap1Q3UHX2 181 aaKnown RBP12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Fam83fQ3UKU4 495 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Tmem151aQ6GQT5 468 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Zfp512bQ6PHP4 879 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Ddx55Q6ZPL9 600 aaKnown RBP12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Lrrc8dQ8BGR2 859 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Bmp3Q8BHE5 468 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Grik4Q8BMF5 956 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Hip1Q8VD75 1029 aaKnown RBP12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Basp1Q91XV3 226 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Rgs1Q9JL25 209 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Akap8lQ9R0L7 642 aaKnown RBP12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 DgkeQ9R1C6 564 aa12.14□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Gm21083A0A0G2JFD5 256 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Ccdc120A2AEV7 629 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Rrn3B2RS91 656 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Adamts14E9PX39 1209 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Gm8909G3UXE9 396 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Slc6a13P31649 602 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 IhhP97812 411 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Fscn2Q32M02 492 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Nol9Q3TZX8 714 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Pag1Q3U1F9 429 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Lrrc47Q505F5 581 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 JrkQ60976 557 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Fam120bQ6RI63 786 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Ssxb3Q6XAS4 170 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Rnf168Q80XJ2 565 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 VcpkmtQ8C436 228 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Tmprss4Q8VCA5 435 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 DtnaQ9D2N4 746 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Chrnb2Q9ERK7 501 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Gm5930D3Z257 264 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Rhox2gL7MUB9 191 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 NadkP58058 439 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 AurkaP97477 395 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Glp2rQ5IXF8 512 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Casc4Q6P2L7 435 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Galnt10Q6P9S7 603 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Ints7Q7TQK1 966 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Olfr698Q7TRN4 311 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Cwf19l2Q8BG79 887 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Fubp1Q91WJ8 651 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Atpaf2Q91YY4 289 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 St7Q99M96 577 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Pard3bQ9CSB4 1203 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 PudpQ9D5U5 234 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Mmp19Q9JHI0 527 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Trpc4apQ9JLV2 797 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Gm36028A0A0U1RPM1 299 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 TpteG5E8H5 664 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 BC024978J3QPC3 361 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 PdgfrbP05622 1098 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Psmd3P14685 530 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Mthfd2P18155 350 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 InhbcP55104 352 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 TankP70347 448 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Adra1dP97714 562 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Patl1Q3TC46 770 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 HexdcQ3U4H6 486 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Slc22a23Q3UHH2 689 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Znf513Q6PD29 541 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Rps27lQ6ZWY3 84 aaKnown RBP12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Cxcr1Q810W6 351 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 TpbglQ8C013 384 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Sgpl1Q8R0X7 568 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Tbc1d19Q8VDV7 526 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Epm2aip1Q8VEH5 606 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Pth2rQ91V95 546 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Zfp64Q99KE8 643 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Itfg1Q99KW9 610 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Upk1aQ9D132 257 aa12.13□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Vmn1r3A2AMT7 306 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Zbtb10E9Q8X5 861 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 SirpaP97797 513 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Rnf157Q3TEL6 685 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Plcl1Q3USB7 1096 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Fndc11Q80WB0 326 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Vmn1r79Q8R285 306 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Gramd1aQ8VEF1 722 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Pcdha11Q91Y19 950 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Sntg2Q925E0 539 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 PigxQ99LV7 254 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 4921530L21RikQ9CQ47 274 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Cdh22Q9WTP5 813 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Klhdc7bA0A286YD60 1263 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Olfr596F8VQ26 312 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Vmn2r5K7N788 911 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 ZfaP23607 742 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 PlaaP27612 794 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Tuba4aP68368 448 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Sephs2P97364 452 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Hexim2Q3TVI4 313 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Arhgap1Q5FWK3 439 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Gpsm1Q6IR34 673 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 ClmpQ8R373 373 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Acsf2Q8VCW8 615 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Q9CR55 154 aa12.12□□□□□ -0.47
Rfx1-201ENSMUST00000005600 Efcab9Q9DAM2 216 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms