RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ANKRD36A6QL64 1941 aa16.96■□□□□ 0.3
PHGDH-213ENST00000641272 SPTY2D1-AS1A0A0U1RR47 76 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 SCAMP1O15126 338 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 BUB1O43683 1085 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 CSF2P04141 144 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 TPM2P07951 284 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 KRT3P12035 628 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 JUNDP17535 347 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 RFC1P35251 1148 aaPredicted RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 ACTN2P35609 894 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 STAT1P42224 750 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 COPB1P53618 953 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 SNRPD1P62314 119 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 GABREP78334 506 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 EIF2B5Q13144 721 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 CLEC16AQ2KHT3 1053 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 SCYL2Q6P3W7 929 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 TRIM72Q6ZMU5 477 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 ENOX1Q8TC92 643 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 MAPK15Q8TD08 544 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 VOPP1Q96AW1 172 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 ISG20Q96AZ6 181 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 MCEEQ96PE7 176 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 DEPDC7Q96QD5 511 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 LGMNQ99538 433 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 WRAP53Q9BUR4 548 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 C1QTNF2Q9BXJ5 285 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 MAGEH1Q9H213 219 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 NOL6Q9H6R4 1146 aaKnown RBP16.95■□□□□ 0.3
PHGDH-213ENST00000641272 FANCLQ9NW38 375 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 TMEM51Q9NW97 253 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 HS3ST3A1Q9Y663 406 aa16.95■□□□□ 0.3
PHGDH-213ENST00000641272 BPTFQ12830 3046 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 LRP4O75096 1905 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 CPED1A4D0V7 1026 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 NEMP2A6NFY4 417 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 CASC3O15234 703 aaKnown RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 AQP9O43315 295 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 TSPAN6O43657 245 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 CREB3O43889 395 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 MMP20O60882 483 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 USP12O75317 370 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 UNGP13051 313 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 EPHB2P29323 1055 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 GEMIN4P57678 1058 aaKnown RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 RHOAP61586 193 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 C1orf61Q13536 156 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 EFHC2Q5JST6 749 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 CDCP2Q5VXM1 449 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 DNAJC24Q6P3W2 148 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 EFL1Q7Z2Z2 1120 aaKnown RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 FGF11Q92914 225 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 IFT43Q96FT9 208 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 HMCESQ96FZ2 354 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 GDAP1L1Q96MZ0 367 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 UBL7Q96S82 380 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 PRORYQ9H606 182 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 SYNDIG1Q9H7V2 258 aa16.94■□□□□ 0.3
PHGDH-213ENST00000641272 APOBEC3BQ9UH17 382 aaKnown RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 PNMA8BQ9ULN7 279 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-213ENST00000641272 ASXL3Q9C0F0 2248 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 INSIG1O15503 277 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 PIGNO95427 931 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 IGSF6O95976 241 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 CALB1P05937 261 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 TGM2P21980 687 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 THOP1P52888 689 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 PFN3P60673 137 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 CXADRP78310 365 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 TLE3Q04726 772 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 MYLK3Q32MK0 819 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 C3orf38Q5JPI3 329 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 ZCCHC8Q6NZY4 707 aaKnown RBP16.93■□□□□ 0.3
PHGDH-213ENST00000641272 WDR59Q6PJI9 974 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 GDPD4Q6W3E5 623 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 MON1BQ7L1V2 547 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 SLFN11Q7Z7L1 901 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 DCP2Q8IU60 420 aaKnown RBP16.93■□□□□ 0.3
PHGDH-213ENST00000641272 SPACA3Q8IXA5 215 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 PHACTR4Q8IZ21 702 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 RTL3Q8N8U3 475 aaKnown RBP16.93■□□□□ 0.3
PHGDH-213ENST00000641272 DENND6BQ8NEG7 585 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 NEK11Q8NG66 645 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 FAM174AQ8TBP5 190 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 CXorf40AQ8TE69 158 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 CENPIQ92674 756 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-213ENST00000641272 NTAN1Q96AB6 310 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 RAB7BQ96AH8 199 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 EPAS1Q99814 870 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 LRRC61Q9BV99 259 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 DUSP23Q9BVJ7 150 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 ABCG4Q9H172 646 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 LMBRD1Q9NUN5 540 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 GPATCH2LQ9NWQ4 482 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 COQ6Q9Y2Z9 468 aa16.93■□□□□ 0.3
PHGDH-213ENST00000641272 AREL1O15033 823 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 MUSKO15146 869 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 KDELR3O43731 214 aa16.92■□□□□ 0.3
PHGDH-213ENST00000641272 CELA2BP08218 269 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-213ENST00000641272 DUSP3P51452 185 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms