RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 S100PP25815 95 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 CDH5P33151 784 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-212ENST00000636194 SLC16A2P36021 539 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 RAP1GAPP47736 663 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 NR2C2P49116 596 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF234Q14588 700 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 C20orf194Q5TEA3 1177 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 PRR23BQ6ZRT6 265 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 SYT12Q8IV01 421 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 SCUBE1Q8IWY4 988 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 KYQ8NBH2 561 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 FNIP1Q8TF40 1166 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 CCDC107Q8WV48 283 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 CD101Q93033 1021 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 TEX13BQ9BXU2 312 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 PARD6BQ9BYG5 372 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF518BQ9C0D4 1074 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 RAB9BQ9NP90 201 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 PCDHA6Q9UN73 950 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 PCDHA8Q9Y5H6 950 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 DGKBQ9Y6T7 804 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 TTC26A0AVF1 554 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 ARPC2O15144 300 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 SLC25A27O95847 323 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 TARSP26639 723 aaKnown RBP6.07□□□□□ -1.44
SCN1A-212ENST00000636194 PSEN2P49810 448 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 TFDP3Q5H9I0 405 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 PRR23CQ6ZRP0 262 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF550Q7Z398 422 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 NUP54Q7Z3B4 507 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 ANKMY2Q8IV38 441 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 FAM126BQ8IXS8 530 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 BHMTQ93088 406 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 RFKQ969G6 155 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 RCN3Q96D15 328 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 QTRT2Q9H974 415 aaKnown RBP6.07□□□□□ -1.44
SCN1A-212ENST00000636194 ZDHHC4Q9NPG8 344 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 MAN1B1Q9UKM7 699 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 GMPPBQ9Y5P6 360 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 MAST1Q9Y2H9 1570 aa6.07□□□□□ -1.44
SCN1A-212ENST00000636194 SNAP23O00161 211 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 CYP27B1O15528 508 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 WFS1O76024 890 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 THRBP10828 461 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 EPCAMP16422 314 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 FRG1Q14331 258 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 KCNA10Q16322 511 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RGS21Q2M5E4 152 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF280DQ6N043 979 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C3orf33Q6P1S2 294 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SSX6Q7RTT6 188 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 COMTD1Q86VU5 262 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 FAM98AQ8NCA5 519 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 NECAB3Q96P71 396 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 AGPAT1Q99943 283 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RBCK1Q9BYM8 510 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 B3GAT2Q9NPZ5 323 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PCDHB16Q9NRJ7 776 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 EURLQ9NYK6 297 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RGS17Q9UGC6 210 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RGS12O14924 1447 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF891A8MT65 544 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 LGALS16A8MUM7 142 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 E7ESA3 106 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TEX33O43247 280 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 GH2P01242 217 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 RAG1P15918 1043 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MFSD10Q14728 455 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MPPE1Q53F39 396 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 BOLA3Q53S33 107 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 P4HA3Q7Z4N8 544 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 VSTM4Q8IW00 320 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TDRD5Q8NAT2 981 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ATP6V1C2Q8NEY4 427 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TCTEX1D2Q8WW35 142 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TRAPPC9Q96Q05 1148 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 GAS2L1Q99501 681 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SYT15Q9BQS2 421 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 FAM83DQ9H4H8 585 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 DLGAP2Q9P1A6 1054 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PCDHGB7Q9Y5F8 929 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 C1QTNF3-AMACRE9PGA6 284 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 CACNB4O00305 520 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 HMGCRP04035 888 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 FDPSP14324 419 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 SDC2P34741 201 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 OASLQ15646 514 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 FAM153CQ494X1 144 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PABPC1LQ4VXU2 614 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 NBPF12Q5TAG4 269 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TTC27Q6P3X3 843 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 NIPAL3Q6P499 406 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 ZNF621Q6ZSS3 439 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 TRAPPC5Q8IUR0 188 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 DHX40Q8IX18 779 aaKnown RBP6.06□□□□□ -1.44
SCN1A-212ENST00000636194 UBR7Q8N806 425 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 PLEKHF1Q96S99 279 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 MIPEPQ99797 713 aa6.06□□□□□ -1.44
SCN1A-212ENST00000636194 HHATLQ9HCP6 504 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms