RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 RABIFP47224 123 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 SUOXP51687 545 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 ZBED6P86452 979 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 DAB2P98082 770 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 OGDHQ02218 1023 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 TMEM259Q4ZIN3 620 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 KYAT3Q6YP21 454 aaKnown RBP13.25□□□□□ -0.29
ATRX-208ENST00000622960 LZTR1Q8N653 840 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 KDF1Q8NAX2 398 aaPredicted RBP13.25□□□□□ -0.29
ATRX-208ENST00000622960 TMEM145Q8NBT3 493 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 DENND6BQ8NEG7 585 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 OR13H1Q8NG92 308 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 CPLX3Q8WVH0 158 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 IFT43Q96FT9 208 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 CINPQ9BW66 212 aaPredicted RBP13.25□□□□□ -0.29
ATRX-208ENST00000622960 MAGEB5Q9BZ81 275 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 ZMIZ1Q9ULJ6 1067 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 ZFR2Q9UPR6 939 aaKnown RBP13.25□□□□□ -0.29
ATRX-208ENST00000622960 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 PCDHGA1Q9Y5H4 931 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATRX-208ENST00000622960 HS3ST3A1Q9Y663 406 aa13.25□□□□□ -0.29
ATRX-208ENST00000622960 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 DFFAO00273 331 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 DDX3XO00571 662 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATRX-208ENST00000622960 CBFA2T2O43439 604 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 SDC3O75056 442 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 PALMO75781 387 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 CD160O95971 181 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 PAK4O96013 591 aaPredicted RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 SERPINA4P29622 427 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 MIPP30301 263 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 GKP32189 559 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 SERPINB6P35237 376 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 THOP1P52888 689 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 HNRNPKP61978 463 aaKnown RBP eCLIP13.24□□□□□ -0.29
ATRX-208ENST00000622960 PTK2BQ14289 1009 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 PIGHQ14442 188 aaPredicted RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 TSR1Q2NL82 804 aaKnown RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 ARTNQ5T4W7 220 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 E4F1Q66K89 784 aaPredicted RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 ERAP2Q6P179 960 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 Q6ZSR6 202 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 PARGQ86W56 976 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 SPATS2Q86XZ4 545 aaKnown RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 BBS5Q8N3I7 341 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 NSMCE1Q8WV22 266 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 CELF6Q96J87 481 aaKnown RBP13.24□□□□□ -0.29
ATRX-208ENST00000622960 EXOC2Q96KP1 924 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 ISCUQ9H1K1 167 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 ATP13A3Q9H7F0 1226 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 DNAJC28Q9NX36 388 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 IFNKQ9P0W0 207 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 MFHAS1Q9Y4C4 1052 aa13.24□□□□□ -0.29
ATRX-208ENST00000622960 CHD5Q8TDI0 1954 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 CHD8Q9HCK8 2581 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 IGLON5A6NGN9 336 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 PRAMEF11O60813 436 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 LRCH4O75427 683 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 TM7SF2O76062 418 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 CKMT2P17540 419 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 NFKBIAP25963 317 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 PCK1P35558 622 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 ABL2P42684 1182 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 RENBPP51606 427 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 CLDN2P57739 230 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 BNIP3Q12983 259 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 ILKQ13418 452 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 TRIM14Q14142 442 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 RFTN1Q14699 578 aaPredicted RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 ZSCAN23Q3MJ62 389 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 BOLA3Q53S33 107 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 TMCO3Q6UWJ1 677 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 DHRS13Q6UX07 377 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 CCNI2Q6ZMN8 369 aaPredicted RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 GCNT7Q6ZNI0 430 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 TMPRSS7Q7RTY8 843 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 ABI3BPQ7Z7G0 1075 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 ASB12Q8WXK4 309 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 HSPH1Q92598 858 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 TUBGCP5Q96RT8 1024 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 KCTD15Q96SI1 283 aaPredicted RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 CPEB1Q9BZB8 566 aaKnown RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 CCDC86Q9H6F5 360 aaKnown RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 LRRC19Q9H756 370 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 ZNHIT6Q9NWK9 470 aaKnown RBP13.23□□□□□ -0.29
ATRX-208ENST00000622960 TOR4AQ9NXH8 423 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 DKK3Q9UBP4 350 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 IP6K2Q9UHH9 426 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 CAPN11Q9UMQ6 739 aa13.23□□□□□ -0.29
ATRX-208ENST00000622960 FFAR2O15552 330 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 ERCC2P18074 760 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 HCAR3P49019 387 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms