RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 FANCMQ8IYD8 2048 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 PRR23AA6NEV1 266 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 KCNJ18B7U540 433 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 M0QYV0 167 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FOXN3O00409 490 aaPredicted RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 EPHB6O15197 1021 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 PAPSS2O95340 614 aaPredicted RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FGFR1OPO95684 399 aaKnown RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 ZBED1O96006 694 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 SETSIPP0DME0 302 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 LCP1P13796 627 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 HNRNPLP14866 589 aaKnown RBP eCLIP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 ZNF18P17022 549 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 ATP5C1P36542 298 aaKnown RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 YWHAGP61981 247 aaKnown RBP eCLIP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 YWHAEP62258 255 aaKnown RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FOXE3Q13461 319 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 KCNJ12Q14500 433 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 KRT31Q15323 416 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 ARHGAP44Q17R89 818 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 NRN1LQ496H8 165 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 CT47A1Q5JQC4 288 aaPredicted RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 C10orf120Q5SQS8 335 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 CCDC183Q5T5S1 534 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 E4F1Q66K89 784 aaPredicted RBP7.78□□□□□ -1.16
CBWD1-228ENST00000619157 TCTN3Q6NUS6 607 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 GBP6Q6ZN66 633 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 SPEM1Q8N4L4 309 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FAM169BQ8N8A8 192 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 KIAA1958Q8N8K9 716 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 SUMF1Q8NBK3 374 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 ZNF606Q8WXB4 792 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 CD101Q93033 1021 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 P2RY13Q9BPV8 354 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FUCA2Q9BTY2 467 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 GANQ9H2C0 597 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 ZDHHC4Q9NPG8 344 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FANCLQ9NW38 375 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 MYOTQ9UBF9 498 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 DNAJC12Q9UKB3 198 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 FBXO4Q9UKT5 387 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 KIAA1257Q9ULG3 409 aa7.78□□□□□ -1.16
CBWD1-228ENST00000619157 MYH10P35580 1976 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 NCAM2O15394 837 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 HOXC11O43248 304 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 PAPSS1O43252 624 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 MSI1O43347 362 aaKnown RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 LETM1O95202 739 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 NFATC1O95644 943 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 HMBSP08397 361 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 SNRPB2P08579 225 aaKnown RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 KRT5P13647 590 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 EEF1GP26641 437 aaKnown RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 PITX1P78337 314 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 CETN1Q12798 172 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 SRSF5Q13243 272 aaKnown RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 KCNAB2Q13303 367 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 LRRC32Q14392 662 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 PRKD1Q15139 912 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 TPD52L1Q16890 204 aaPredicted RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 ZNF528Q3MIS6 628 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 HS1BP3Q53T59 392 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 DGKKQ5KSL6 1271 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 EMC10Q5UCC4 262 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 BSPRYQ5W0U4 402 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 C1orf228Q6PIY5 440 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 SLC47A2Q86VL8 602 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 DDX42Q86XP3 938 aaKnown RBP eCLIP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 FAM71AQ8IYT1 594 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 SCML4Q8N228 414 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 MYEOVQ96EZ4 313 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 VPS16Q9H269 839 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 LRRC4Q9HBW1 653 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 SPHK2Q9NRA0 654 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 HESX1Q9UBX0 185 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 RASAL2Q9UJF2 1139 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 AGO1Q9UL18 857 aaKnown RBP7.77□□□□□ -1.17
CBWD1-228ENST00000619157 CLEC4EQ9ULY5 219 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 SIK3Q9Y2K2 1263 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 FAM186AA6NE01 2351 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 MYOFQ9NZM1 2061 aa7.77□□□□□ -1.17
CBWD1-228ENST00000619157 FAM170AA1A519 330 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 E5RJQ4 531 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 SLC9A3R1O14745 358 aaPredicted RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 THAP12O43422 761 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 TULP3O75386 442 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 MBD3O95983 291 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 CISD3P0C7P0 127 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 ATP1A3P13637 1013 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 ZNF16P17020 682 aaPredicted RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 TRIM21P19474 475 aaKnown RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 DRD1P21728 446 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 CORO1AP31146 461 aaKnown RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 CXCL12P48061 93 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 PXNP49023 591 aaPredicted RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 FNTBP49356 437 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 CCR3P51677 355 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 COPB1P53618 953 aaKnown RBP7.76□□□□□ -1.17
CBWD1-228ENST00000619157 MFAP3P55082 362 aa7.76□□□□□ -1.17
CBWD1-228ENST00000619157 KDSRQ06136 332 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms