RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 MTHFRP42898 656 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 WDR72Q3MJ13 1102 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 FBXO39Q8N4B4 442 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ATL1Q8WXF7 558 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 PPP1R16BQ96T49 567 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MUC3BQ9H195 1237 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 NMRK2Q9NPI5 230 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 KCND2Q9NZV8 630 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 PRKAG2Q9UGJ0 569 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 SMIM22K7EJ46 135 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 NARSO43776 548 aaKnown RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 NRP2O60462 931 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 RRM1P23921 792 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 GPR15P49685 360 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CLCA4Q14CN2 919 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF829Q3KNS6 432 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CEP76Q8TAP6 659 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CCDC107Q8WV48 283 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 NMRAL1Q9HBL8 299 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 LEF1Q9UJU2 399 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 KCNA5P22460 613 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 LCN1P31025 176 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CD79BP40259 229 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ADAM8P78325 824 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 PLD1Q13393 1074 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MKL1Q969V6 931 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CIB1Q99828 191 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CLPBQ9H078 707 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 EXO5Q9H790 373 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 WDR6Q9NNW5 1121 aaKnown RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 FAM105AQ9NUU6 356 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ZNF232Q9UNY5 417 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 FAM47E-STBD1D6RA91 191 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 H0YJX3 145 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 CLPXO76031 633 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 GADD45AP24522 165 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 MTAPQ13126 283 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 FCGR1BQ92637 280 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ANKRA2Q9H9E1 313 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 NCAPD2Q15021 1401 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 ANGPTL1O95841 491 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 VEPH1Q14D04 833 aa15.15■□□□□ 0.02
COL5A1-208ENST00000618395 A2MP01023 1474 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 A0A087X1B8 175 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 RBMXL2O75526 392 aaKnown RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ECHS1P30084 290 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 EIF4A1P60842 406 aaKnown RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 BMPR2Q13873 1038 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 PLK2Q9NYY3 685 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 RPLP0P05388 317 aaKnown RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 GNA12Q03113 381 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF639Q9UID6 485 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 TIPRLO75663 272 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 SLC15A1P46059 708 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 SNRPFP62306 86 aaKnown RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF423Q2M1K9 1284 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 MCOLN3Q8TDD5 553 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 FBXO6Q9NRD1 293 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 GMIPQ9P107 970 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 PRKAB1Q9Y478 270 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ACMSDQ8TDX5 336 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 KAT5Q92993 513 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 POLD2P49005 469 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 SLC10A7Q0GE19 358 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 FIGNQ5HY92 759 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF438Q7Z4V0 828 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ARMC10Q8N2F6 343 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ERVK-11Q9UQG0 969 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 ADGRL3Q9HAR2 1447 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 PDE2AO00408 941 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 DEFA6Q01524 100 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 PPIL2Q13356 520 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 UBE2J2Q8N2K1 259 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 HIPK3Q9H422 1215 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 PTCH1Q13635 1447 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 EYA4O95677 639 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 MARSP56192 900 aaKnown RBP15.14■□□□□ 0.01
COL5A1-208ENST00000618395 DLG2Q15700 870 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 LRRC70Q7Z2Q7 622 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 TIGD4Q8IY51 512 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 BPIFB1Q8TDL5 484 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 BLOC1S4Q9NUP1 217 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 GLS2Q9UI32 602 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 USP18Q9UMW8 372 aa15.14■□□□□ 0.01
COL5A1-208ENST00000618395 A0A096LPK6 155 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 SHOX2O60902 331 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 GEMP55040 296 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 GCNT7Q6ZNI0 430 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 SLC7A14Q8TBB6 771 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CD93Q9NPY3 652 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 GGA3Q9NZ52 723 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 AP4E1Q9UPM8 1137 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms