RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 MED15Q96RN5 788 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 C1QTNF2Q9BXJ5 285 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 MUC3BQ9H195 1237 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 NUP62CLQ9H1M0 184 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 LRRN3Q9H3W5 708 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 ST7Q9NRC1 585 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 COX16Q9P0S2 106 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 IL36AQ9UHA7 158 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 GGT7Q9UJ14 662 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 ANAPC2Q9UJX6 822 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 KIAA1257Q9ULG3 409 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 VANGL2Q9ULK5 521 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 HS3ST2Q9Y278 367 aa14□□□□□ -0.17
SHKBP1-208ENST00000595726 A0A1W2PQC6 194 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 P4HA2O15460 535 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 IGLV3-25P01717 112 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 CCR10P46092 362 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 NEK3P51956 506 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 THOP1P52888 689 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 AUHQ13825 339 aaKnown RBP13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 TAF5Q15542 800 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 PCDH19Q8TAB3 1148 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 LMO3Q8TAP4 145 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 CCDC114Q96M63 670 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 PPP1R9BQ96SB3 815 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 SLC13A1Q9BZW2 595 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 VPS51Q9UID3 782 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 ITM2BQ9Y287 266 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 WASF2Q9Y6W5 498 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 SCN8AQ9UQD0 1980 aa13.99□□□□□ -0.17
SHKBP1-208ENST00000595726 CACNA1DQ01668 2161 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 MTSS1O43312 755 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 CNTN5O94779 1100 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 FGFR1OPO95684 399 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 CCL4P13236 92 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 TBXAS1P24557 533 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 ZFP36L1Q07352 338 aaKnown RBP13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 EIF4EBP2Q13542 120 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 TTC39BQ5VTQ0 682 aaPredicted RBP13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 ARL10Q8N8L6 244 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 MLKLQ8NB16 471 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 GBP4Q96PP9 640 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 SLC12A6Q9UHW9 1150 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 DAAM1Q9Y4D1 1078 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 PCDHB4Q9Y5E5 795 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 RNF215Q9Y6U7 377 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 UNC13CQ8NB66 2214 aa13.98□□□□□ -0.17
SHKBP1-208ENST00000595726 A0A0D9SEW6 157 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 ZNF821O75541 412 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 PAEPP09466 180 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 L1CAMP32004 1257 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 IGFALSP35858 605 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 EIF4A3P38919 411 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 ABL2P42684 1182 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 DNA2P51530 1060 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 ARSDP51689 593 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 YWHAEP62258 255 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 KRT83P78385 493 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 PPARDQ03181 441 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 CETN1Q12798 172 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 DPCR1Q3MIW9 517 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 PHF19Q5T6S3 580 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 C22orf39Q6P5X5 142 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 PARS2Q7L3T8 475 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 VPS36Q86VN1 386 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 CCNJLQ8IV13 435 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 SFTPA2Q8IWL1 248 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 KAT5Q92993 513 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 NKD1Q969G9 470 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 PMEPA1Q969W9 287 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 TSACCQ96A04 125 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 MIB2Q96AX9 1013 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 CENPTQ96BT3 561 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 PPP1R16AQ96I34 528 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 NT5C1BQ96P26 610 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 SEMA6CQ9H3T2 930 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 MBNL1Q9NR56 388 aaKnown RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 GPR34Q9UPC5 381 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 TBC1D30Q9Y2I9 924 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 CSMD1Q96PZ7 3565 aa13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 RP1L1Q8IWN7 2480 aaPredicted RBP13.97□□□□□ -0.17
SHKBP1-208ENST00000595726 LIFP15018 202 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 ITGB7P26010 798 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 GKP32189 559 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 GPD2P43304 727 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 MLLT10P55197 1068 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 YWHAZP63104 245 aaKnown RBP13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 PTK2BQ14289 1009 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 C16orf72Q14CZ0 275 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 ALFQ53S48 1182 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 DENND1BQ6P3S1 775 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 BEND5Q7L4P6 421 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 RD3Q7Z3Z2 195 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 IRF2BP1Q8IU81 584 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 HID1Q8IV36 788 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 ARHGEF19Q8IW93 802 aa13.96□□□□□ -0.17
SHKBP1-208ENST00000595726 PPM1KQ8N3J5 372 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms