RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 RNF135Q8IUD6 432 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 ATP2A3Q93084 1043 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 E2F7Q96AV8 911 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 NSMCE3Q96MG7 304 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 FAM83CQ9BQN1 747 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 EBF3Q9H4W6 596 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 THG1LQ9NWX6 298 aaKnown RBP15.37■□□□□ 0.05
VRK3-207ENST00000594092 RABGEF1Q9UJ41 708 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 BRWD1Q9NSI6 2320 aa15.37■□□□□ 0.05
VRK3-207ENST00000594092 KIF26AQ9ULI4 1882 aaPredicted RBP15.36■□□□□ 0.05
VRK3-207ENST00000594092 TRIM24O15164 1050 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 INSIG1O15503 277 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SMAD6O43541 496 aaKnown RBP15.36■□□□□ 0.05
VRK3-207ENST00000594092 NFATC1O95644 943 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SERPINF2P08697 491 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 GSTA2P09210 222 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 LAMP2P13473 410 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 CES1P23141 567 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 CTSOP43234 321 aaPredicted RBP15.36■□□□□ 0.05
VRK3-207ENST00000594092 SLC14A2Q15849 920 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 STEAP4Q687X5 459 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 KIAA0907Q7Z7F0 614 aaPredicted RBP15.36■□□□□ 0.05
VRK3-207ENST00000594092 MFSD6LQ8IWD5 586 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.36■□□□□ 0.05
VRK3-207ENST00000594092 SMRP1Q8NCR6 262 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 FBF1Q8TES7 1133 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 FAM161BQ96MY7 647 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 NUDCD1Q96RS6 583 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 PLA2G2FQ9BZM2 168 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 ARNT2Q9HBZ2 717 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SCUBE2Q9NQ36 999 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 FETUBQ9UGM5 382 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 DENND4AQ7Z401 1863 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 CXorf51AA0A1B0GTR3 108 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 TCRBV9S1A1TA0A576 114 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 OTOL1A6NHN0 477 aaPredicted RBP15.36■□□□□ 0.05
VRK3-207ENST00000594092 PGAM1P18669 254 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 STX2P32856 288 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 CHRNA4P43681 627 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 RHOAP61586 193 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SLC20A2Q08357 652 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 NSUN2Q08J23 767 aaKnown RBP eCLIP15.36■□□□□ 0.05
VRK3-207ENST00000594092 FCHO2Q0JRZ9 810 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 DMC1Q14565 340 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 TNFAIP8L3Q5GJ75 292 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 ADIPOR2Q86V24 386 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 TDRPQ86YL5 185 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 CCNJLQ8IV13 435 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SLC25A41Q8N5S1 370 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 XPO6Q96QU8 1125 aaKnown RBP15.36■□□□□ 0.05
VRK3-207ENST00000594092 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 IL22Q9GZX6 179 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 ACSS3Q9H6R3 686 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SAMD15Q9P1V8 674 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 SLC24A2Q9UI40 661 aa15.36■□□□□ 0.05
VRK3-207ENST00000594092 LOC285095A0A1B0GVY8 99 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 POC1B-GALNT4F8VUJ3 575 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 ATP9BO43861 1147 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 CISD3P0C7P0 127 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 STK19P49842 368 aaPredicted RBP15.35■□□□□ 0.05
VRK3-207ENST00000594092 PPP2R2AP63151 447 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 CDK18Q07002 472 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 SLC1A5Q15758 541 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 EMC10Q5UCC4 262 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 PARM1Q6UWI2 310 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 TAOK1Q7L7X3 1001 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 METTL3Q86U44 580 aaKnown RBP15.35■□□□□ 0.05
VRK3-207ENST00000594092 C12orf40Q86WS4 652 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 ELSPBP1Q96BH3 223 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 FEM1CQ96JP0 617 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 RPL10LQ96L21 214 aaKnown RBP15.35■□□□□ 0.05
VRK3-207ENST00000594092 KXD1Q9BQD3 176 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 ECT2Q9H8V3 914 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 HPS4Q9NQG7 708 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 CTNNAL1Q9UBT7 734 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 HS3ST2Q9Y278 367 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 MIA3Q5JRA6 1907 aa15.35■□□□□ 0.05
VRK3-207ENST00000594092 SPTBN5Q9NRC6 3674 aaKnown RBP15.35■□□□□ 0.05
VRK3-207ENST00000594092 ATXN1LP0C7T5 689 aaKnown RBP15.34■□□□□ 0.05
VRK3-207ENST00000594092 SRCP12931 536 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 GCAP28676 217 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 ATP1A2P50993 1020 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 GRM2Q14416 872 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 TERF2Q15554 542 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 GAB4Q2WGN9 574 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 ATXN7L2Q5T6C5 722 aaPredicted RBP15.34■□□□□ 0.05
VRK3-207ENST00000594092 TMEM215Q68D42 235 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 ETFBKMTQ8IXQ9 262 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 AHI1Q8N157 1196 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 GSDMBQ8TAX9 411 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 SUSD6Q92537 303 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 FGF14Q92915 247 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 LRCH3Q96II8 777 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 NECTIN4Q96NY8 510 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 CYTH2Q99418 400 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 GAS2L1Q99501 681 aaPredicted RBP15.34■□□□□ 0.05
VRK3-207ENST00000594092 PSD3Q9NYI0 1048 aa15.34■□□□□ 0.05
VRK3-207ENST00000594092 TBK1Q9UHD2 729 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms