RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SP110Q9HB58 689 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ZDHHC4Q9NPG8 344 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 ELOVL2Q9NXB9 296 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 IPO11Q9UI26 975 aaKnown RBP12.84□□□□□ -0.35
VMP1-202ENST00000585847 HPCAL4Q9UM19 191 aa12.84□□□□□ -0.35
VMP1-202ENST00000585847 PTPRZ1P23471 2315 aaPredicted RBP12.83□□□□□ -0.36
VMP1-202ENST00000585847 TBC1D3BA6NDS4 549 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 RASA4BC9J798 803 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 E7ESA3 106 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 RASA4O43374 803 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 OPA1O60313 960 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 RNF40O75150 1001 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 CCNB1P14635 433 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.367e-9■■■■■ 28.7
VMP1-202ENST00000585847 AOC1P19801 751 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 PHBP35232 272 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 ID4P47928 161 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 ARF5P84085 180 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 WASHC5Q12768 1159 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 GRSF1Q12849 480 aaKnown RBP eCLIP12.83□□□□□ -0.36
VMP1-202ENST00000585847 SERINC3Q13530 473 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 ENPP2Q13822 863 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 DMC1Q14565 340 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 DENND2CQ68D51 928 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 ERMP1Q7Z2K6 904 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 USP33Q8TEY7 942 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 CYB5D2Q8WUJ1 264 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 CPT1BQ92523 772 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 RBM15Q96T37 977 aaKnown RBP eCLIP12.83□□□□□ -0.36
VMP1-202ENST00000585847 LGMNQ99538 433 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 FAM118BQ9BPY3 351 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 CCDC77Q9BR77 488 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 C2orf49Q9BVC5 232 aaPredicted RBP12.83□□□□□ -0.36
VMP1-202ENST00000585847 STMN4Q9H169 189 aaPredicted RBP12.83□□□□□ -0.36
VMP1-202ENST00000585847 LRRC40Q9H9A6 602 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 POLR3BQ9NW08 1133 aaPredicted RBP12.83□□□□□ -0.36
VMP1-202ENST00000585847 C2orf42Q9NWW7 574 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.36
VMP1-202ENST00000585847 FETUBQ9UGM5 382 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 VPS51Q9UID3 782 aa12.83□□□□□ -0.36
VMP1-202ENST00000585847 DFFAO00273 331 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 TP73O15350 636 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 PRAMEF11O60813 436 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 ADAM23O75077 832 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 SUN1O94901 812 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 MAP3K6O95382 1288 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 MT-CO1P00395 513 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 DCNP07585 359 aaKnown RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 VAV1P15498 845 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 PTPN3P26045 913 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 TIE1P35590 1138 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 IL12RB1P42701 662 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 MAPK8P45983 427 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 VPS41P49754 854 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 STK19P49842 368 aaPredicted RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 PAPOLAP51003 745 aaKnown RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 PMS2P54278 862 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 SEC13P55735 322 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 MRPS25P82663 173 aaKnown RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 EIF4HQ15056 248 aaKnown RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 E2F5Q15329 346 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 ANGPT1Q15389 498 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 TRIP13Q15645 432 aaPredicted RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 DGKKQ5KSL6 1271 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 MARC1Q5VT66 337 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 NAPEPLDQ6IQ20 393 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 ZNF449Q6P9G9 518 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 CCDC33Q8N5R6 958 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 TEX26Q8N6G2 289 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 ACDQ96AP0 544 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 FCRL5Q96RD9 977 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 NELL2Q99435 816 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 PDFQ9HBH1 243 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 CD248Q9HCU0 757 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 RSPH14Q9UHP6 348 aa12.82□□□□□ -0.36
VMP1-202ENST00000585847 MRPS17Q9Y2R5 130 aaKnown RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 RIF1Q5UIP0 2472 aaKnown RBP12.82□□□□□ -0.36
VMP1-202ENST00000585847 VPS13AQ96RL7 3174 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 WASH3PC4AMC7 463 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 J3KR12 359 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ALOX15BO15296 676 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 KDELR3O43731 214 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 AP2A1O95782 977 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 PEX11BO96011 259 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 APRTP07741 180 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 DLDP09622 509 aaKnown RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 POLR2EP19388 210 aaKnown RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 LMAN1P49257 510 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 VASPP50552 380 aaPredicted RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 GEMP55040 296 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 SLC20A2Q08357 652 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ILF2Q12905 390 aaKnown RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 ZNF234Q14588 700 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 FBXO43Q4G163 708 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 PREPLQ4J6C6 727 aaPredicted RBP12.81□□□□□ -0.36
VMP1-202ENST00000585847 CCDC38Q502W7 563 aa12.81□□□□□ -0.36
VMP1-202ENST00000585847 INO80DQ53TQ3 878 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms