RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CLPBQ9H078 707 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 NDFIP2Q9NV92 336 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 DNAJC12Q9UKB3 198 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 NAV2Q8IVL1 2488 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 FOXN3O00409 490 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-221ENST00000583080 NEMP1O14524 444 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 TSPAN6O43657 245 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 F9P00740 461 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 UGT2B4P06133 528 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 THOP1P52888 689 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 SNX16P57768 344 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 RAB6CQ53S08 254 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 LEKR1Q6ZMV7 388 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 BNIPLQ7Z465 357 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 B3GNT8Q7Z7M8 397 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 VPS36Q86VN1 386 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 ARL14Q8N4G2 192 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 CENPTQ96BT3 561 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 CCDC97Q96F63 343 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-221ENST00000583080 CFAP57Q96MR6 1250 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 RAB6CQ9H0N0 254 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 PAXBP1Q9Y5B6 917 aa16.41■□□□□ 0.22
SREBF1-221ENST00000583080 CHD5Q8TDI0 1954 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 CCDC187A0A096LP49 1063 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 LMO7DNF2Z398 122 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 GOLGA8SH3BPF8 625 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 KRIT1O00522 736 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 EFSO43281 561 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 ITGA2BP08514 1039 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 TSHRP16473 764 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 CDH5P33151 784 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-221ENST00000583080 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 SRSF6Q13247 344 aaKnown RBP16.4■□□□□ 0.22
SREBF1-221ENST00000583080 SPIDRQ14159 915 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 TCEA2Q15560 299 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 ZNF805Q5CZA5 627 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 IRF2BP1Q8IU81 584 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 KYQ8NBH2 561 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 BTN2A2Q8WVV5 523 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 ASB12Q8WXK4 309 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 NAT6Q93015 286 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 RAB7BQ96AH8 199 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 HAPLN3Q96S86 360 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 MBNL1Q9NR56 388 aaKnown RBP16.4■□□□□ 0.22
SREBF1-221ENST00000583080 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 RABGEF1Q9UJ41 708 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 PADI4Q9UM07 663 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 AHCTF1Q8WYP5 2266 aa16.4■□□□□ 0.22
SREBF1-221ENST00000583080 GTPBP10A4D1E9 387 aaKnown RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 NTN3O00634 580 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 RIOK3O14730 519 aaKnown RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 AREL1O15033 823 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 YY2O15391 372 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 FGFR1OPO95684 399 aaKnown RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ANXA6P08133 673 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ITIH2P19823 946 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 SCNN1AP37088 669 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 GABRB2P47870 512 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 RPIAP49247 311 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ARL13BQ3SXY8 428 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ATXN7L2Q5T6C5 722 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 TAF3Q5VWG9 929 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 MACC1Q6ZN28 852 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 NYAP1Q6ZVC0 841 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 PRICKLE2Q7Z3G6 844 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 FAM71AQ8IYT1 594 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 EXD3Q8N9H8 876 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 TMEM35BQ8NCS4 154 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ISG20Q96AZ6 181 aaKnown RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 C18orf8Q96DM3 657 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 KLHL32Q96NJ5 620 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 CCNL2Q96S94 520 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 TRIM4Q9C037 500 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 SIRPGQ9P1W8 387 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 ATXN7L1Q9ULK2 861 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-221ENST00000583080 NEU3Q9UQ49 428 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 SPTA1P02549 2419 aa16.39■□□□□ 0.21
SREBF1-221ENST00000583080 PLD2O14939 933 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 MMP20O60882 483 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 WISP1O95388 367 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 GSRP00390 522 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 HGFP14210 728 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 MLLT3P42568 568 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-221ENST00000583080 KCNC4Q03721 635 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 PTK2BQ14289 1009 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 ACBD5Q5T8D3 534 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-221ENST00000583080 FAXCQ5TGI0 409 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 MANEALQ5VSG8 457 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 NLRP14Q86W24 1093 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 EMC1Q8N766 993 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 TP53I13Q8NBR0 393 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-221ENST00000583080 NETO2Q8NC67 525 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 OR2AP1Q8NGE2 309 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 PCDH19Q8TAB3 1148 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 WDR48Q8TAF3 677 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 GLMNQ92990 594 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 CCDC74AQ96AQ1 378 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms