RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.78■□□□□ 0.76
SREBF1-220ENST00000581707 LHX3Q9UBR4 397 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 CA5BQ9Y2D0 317 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 BTBD3Q9Y2F9 522 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 MFHAS1Q9Y4C4 1052 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 RARAP10276 462 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 AKT2P31751 481 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 ARL4AP40617 200 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 TMEM259Q4ZIN3 620 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 KIAA1161Q6NSJ0 714 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 GLRX5Q86SX6 157 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 SPATS2Q86XZ4 545 aaKnown RBP19.77■□□□□ 0.76
SREBF1-220ENST00000581707 LZTR1Q8N653 840 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 TMEM145Q8NBT3 493 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 TEKT4Q8WW24 435 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 KLHDC7BQ96G42 594 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 CDC6Q99741 560 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 MYOCQ99972 504 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 DEF6Q9H4E7 631 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 ERVMER34-1Q9H9K5 563 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 WASF3Q9UPY6 502 aa19.77■□□□□ 0.76
SREBF1-220ENST00000581707 SSU72P8A0A1W2PR75 194 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 DFFAO00273 331 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 NEMP1O14524 444 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 TSPAN6O43657 245 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 TOP3BO95985 862 aaKnown RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 HNRNPA2B1P22626 353 aaKnown RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 ABL2P42684 1182 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 GRK6P43250 576 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 ARRB1P49407 418 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 SLC25A11Q02978 314 aaKnown RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 MAPK8IP2Q13387 824 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 SHBQ15464 509 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 ASTE1Q2TB18 679 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 TXNRD3NBQ6F5E7 133 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 POLNQ7Z5Q5 900 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 TTC7BQ86TV6 843 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 NPWQ8N729 165 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 ZNF564Q8TBZ8 553 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 CTNNBL1Q8WYA6 563 aaPredicted RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 EXOC2Q96KP1 924 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 SLC17A9Q9BYT1 436 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 CPEB1Q9BZB8 566 aaKnown RBP19.76■□□□□ 0.75
SREBF1-220ENST00000581707 FZD3Q9NPG1 666 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 ABHD10Q9NUJ1 306 aa19.76■□□□□ 0.75
SREBF1-220ENST00000581707 YKT6O15498 198 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 INSIG1O15503 277 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 PALMO75781 387 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 TRIM16O95361 564 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 H2AFZP0C0S5 128 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 AMPD1P23109 780 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 SSR1P43307 286 aaKnown RBP19.75■□□□□ 0.75
SREBF1-220ENST00000581707 ADKP55263 362 aaKnown RBP19.75■□□□□ 0.75
SREBF1-220ENST00000581707 INAVAQ3KP66 663 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 H2AFVQ71UI9 128 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 ZSCAN30Q86W11 494 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 OXR1Q8N573 874 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 BAHD1Q8TBE0 780 aaPredicted RBP19.75■□□□□ 0.75
SREBF1-220ENST00000581707 CSPG4P5Q96PW8 444 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 PACSIN1Q9BY11 444 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 SP110Q9HB58 689 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 CTTNBP2NLQ9P2B4 639 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 UVRAGQ9P2Y5 699 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 DKK3Q9UBP4 350 aa19.75■□□□□ 0.75
SREBF1-220ENST00000581707 IGLON5A6NGN9 336 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 AKR1B10O60218 316 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 MFAP3LO75121 409 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 PAK4O96013 591 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-220ENST00000581707 ITGAVP06756 1048 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 FTH1P19P0C7X4 201 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 THEGLP0DJG4 465 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 SPINK2P20155 84 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 RXRGP48443 463 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 IL10RBQ08334 325 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 SGCGQ13326 291 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 FGL2Q14314 439 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 RFTN1Q14699 578 aaPredicted RBP19.74■□□□□ 0.75
SREBF1-220ENST00000581707 GRM3Q14832 879 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 HADHQ16836 314 aaKnown RBP19.74■□□□□ 0.75
SREBF1-220ENST00000581707 TMCO3Q6UWJ1 677 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 ARHGAP36Q6ZRI8 547 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 GATAD2AQ86YP4 633 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 CHP1Q99653 195 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 SCNM1Q9BWG6 230 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 PCDH18Q9HCL0 1135 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 ETNK2Q9NVF9 386 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 IPO11Q9UI26 975 aaKnown RBP19.74■□□□□ 0.75
SREBF1-220ENST00000581707 GGT7Q9UJ14 662 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 APOBEC2Q9Y235 224 aaKnown RBP19.74■□□□□ 0.75
SREBF1-220ENST00000581707 ITM2BQ9Y287 266 aa19.74■□□□□ 0.75
SREBF1-220ENST00000581707 AREL1O15033 823 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 SPINT1O43278 529 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 HYAL3O43820 417 aaPredicted RBP19.73■□□□□ 0.75
SREBF1-220ENST00000581707 TIMP2P16035 220 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 CLDN2P57739 230 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 KRT81Q14533 505 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 TP53INP2Q8IXH6 220 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 TSEN2Q8NCE0 465 aaKnown RBP19.73■□□□□ 0.75
SREBF1-220ENST00000581707 OR13H1Q8NG92 308 aa19.73■□□□□ 0.75
SREBF1-220ENST00000581707 FAM174AQ8TBP5 190 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms