RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 VPS36Q86VN1 386 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 ZSCAN30Q86W11 494 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 RYBPQ8N488 228 aaPredicted RBP20.18■□□□□ 0.82
CCDC40-206ENST00000572083 FBXO39Q8N4B4 442 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 KYQ8NBH2 561 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 TBCBQ99426 244 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 SIRPGQ9P1W8 387 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 HECAQ9UBI9 543 aaPredicted RBP20.18■□□□□ 0.82
CCDC40-206ENST00000572083 GULP1Q9UBP9 304 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 PCDHGC3Q9UN70 934 aa20.18■□□□□ 0.82
CCDC40-206ENST00000572083 IGLV3-10A0A075B6K4 115 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 ILVBLA1L0T0 632 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 NOBOXO60393 691 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 STX17P56962 302 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 DEUP1Q05D60 604 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 PTK2BQ14289 1009 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 LRRC73Q5JTD7 316 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 ARTNQ5T4W7 220 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 FAXCQ5TGI0 409 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 TRIM65Q6PJ69 517 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 RAB11FIP2Q7L804 512 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 ZNF397Q8NF99 534 aaPredicted RBP20.17■□□□□ 0.82
CCDC40-206ENST00000572083 CCDC74AQ96AQ1 378 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 CENPTQ96BT3 561 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 SGF29Q96ES7 293 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 STARD5Q9NSY2 213 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 RRN3Q9NYV6 651 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC40-206ENST00000572083 ZNF212Q9UDV6 495 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 STAP1Q9ULZ2 295 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 PCDHGA7Q9Y5G6 932 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 DOCK4Q8N1I0 1966 aa20.17■□□□□ 0.82
CCDC40-206ENST00000572083 FAM170AA1A519 330 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 D6RAR5 112 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 FAM87AP0C7U9 286 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 MARSP56192 900 aaKnown RBP20.16■□□□□ 0.82
CCDC40-206ENST00000572083 SRSF1Q07955 248 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCDC40-206ENST00000572083 DRC7Q8IY82 874 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 SDR16C5Q8N3Y7 309 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 ARL10Q8N8L6 244 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 PCDH19Q8TAB3 1148 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 ASB12Q8WXK4 309 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 RAB7BQ96AH8 199 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 GFM1Q96RP9 751 aaKnown RBP20.16■□□□□ 0.82
CCDC40-206ENST00000572083 SRRTQ9BXP5 876 aaKnown RBP20.16■□□□□ 0.82
CCDC40-206ENST00000572083 DOLKQ9UPQ8 538 aa20.16■□□□□ 0.82
CCDC40-206ENST00000572083 TLN1Q9Y490 2541 aaKnown RBP20.16■□□□□ 0.82
CCDC40-206ENST00000572083 RELNP78509 3460 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 BICDL2A1A5D9 508 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 PPP1R3GB7ZBB8 358 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 AGRPO00253 132 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 GNA14O95837 355 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 CD160O95971 181 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 UGT2B4P06133 528 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 SLC9A1P19634 815 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 BMP6P22004 513 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 PPP1R2P41236 205 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 CCL7P80098 99 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 GNA12Q03113 381 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 SLC20A2Q08357 652 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 EIF3IQ13347 325 aaKnown RBP20.15■□□□□ 0.82
CCDC40-206ENST00000572083 ZNF805Q5CZA5 627 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 ZNF783Q6ZMS7 281 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 MACC1Q6ZN28 852 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 ATG14Q6ZNE5 492 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 PGAP3Q96FM1 320 aaPredicted RBP20.15■□□□□ 0.82
CCDC40-206ENST00000572083 C1orf74Q96LT6 269 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 TBATAQ96M53 351 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
CCDC40-206ENST00000572083 STRADBQ9C0K7 418 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 MBNL1Q9NR56 388 aaKnown RBP20.15■□□□□ 0.82
CCDC40-206ENST00000572083 PISDQ9UG56 409 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 HOOK1Q9UJC3 728 aaKnown RBP20.15■□□□□ 0.82
CCDC40-206ENST00000572083 PAXBP1Q9Y5B6 917 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 AHCTF1Q8WYP5 2266 aa20.15■□□□□ 0.82
CCDC40-206ENST00000572083 GOLGA6L4A6NEF3 574 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 KRIT1O00522 736 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 RPLP0P05388 317 aaKnown RBP20.14■□□□□ 0.81
CCDC40-206ENST00000572083 ITGB6P18564 788 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 ACVRL1P37023 503 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 EIF4A3P38919 411 aaKnown RBP20.14■□□□□ 0.81
CCDC40-206ENST00000572083 INHBCP55103 352 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 SNX16P57768 344 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 PPARDQ03181 441 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 VASH2Q86V25 355 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 SHC3Q92529 594 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 NT5C3BQ969T7 300 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 ZYG11BQ9C0D3 744 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 APEX2Q9UBZ4 518 aa20.14■□□□□ 0.81
CCDC40-206ENST00000572083 A0A1W2PQM1 296 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 MMP20O60882 483 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 ITGB2P05107 769 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 JMJD7P0C870 316 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 PNMA6AP0CW24 399 aaPredicted RBP20.13■□□□□ 0.81
CCDC40-206ENST00000572083 LIPCP11150 499 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 KRT9P35527 623 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 YPEL5P62699 121 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 COLEC12Q5KU26 742 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms