RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 RNF8O76064 485 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 POP4O95707 220 aaKnown RBP13.84□□□□□ -0.19
PRPF8-202ENST00000571346 FTLP02792 175 aaPredicted RBP13.84□□□□□ -0.19
PRPF8-202ENST00000571346 PRKCIP41743 596 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 ACADVLP49748 655 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 SGCGQ13326 291 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 SERINC3Q13530 473 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 FGL2Q14314 439 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 CA9Q16790 459 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 KLHL40Q2TBA0 621 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 MYLK3Q32MK0 819 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 GDPD4Q6W3E5 623 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 KYAT3Q6YP21 454 aaKnown RBP13.84□□□□□ -0.19
PRPF8-202ENST00000571346 Q6ZSR6 202 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 PLPP6Q8IY26 295 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 MDM1Q8TC05 714 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 CASKIN2Q8WXE0 1202 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 RAB7BQ96AH8 199 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 ARHGEF26Q96DR7 871 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 TRIM11Q96F44 468 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 FEM1CQ96JP0 617 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 CCDC86Q9H6F5 360 aaKnown RBP13.84□□□□□ -0.19
PRPF8-202ENST00000571346 CBX8Q9HC52 389 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 DNAJC28Q9NX36 388 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 AIPL1Q9NZN9 384 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 ITPR1Q14643 2758 aa13.84□□□□□ -0.19
PRPF8-202ENST00000571346 POM121BA6NF01 834 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 IGLON5A6NGN9 336 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 WASH4PA8MWX3 477 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 SPINT1O43278 529 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 TSPAN6O43657 245 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 PIGNO95427 931 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 PAK4O96013 591 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 XPAP23025 273 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 HTR7P34969 479 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 HNF1BP35680 557 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 YBEYP58557 167 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 DAB2P98082 770 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 FANCCQ00597 558 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 ZNF542PQ5EBM4 170 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 CFAP58Q5T655 872 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 RFX8Q6ZV50 586 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 KANSL1Q7Z3B3 1105 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 ABI3BPQ7Z7G0 1075 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 PROSER1Q86XN7 944 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 UMODL1-AS1Q8N2C9 162 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 KCTD15Q96SI1 283 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 WRAP53Q9BUR4 548 aaKnown RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 CAAP1Q9H8G2 361 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 KLHL11Q9NVR0 708 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 UCKL1Q9NWZ5 548 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 DONSONQ9NYP3 566 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 LHX3Q9UBR4 397 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 RALYQ9UKM9 306 aaKnown RBP13.83□□□□□ -0.2
PRPF8-202ENST00000571346 PCDHGA1Q9Y5H4 931 aa13.83□□□□□ -0.2
PRPF8-202ENST00000571346 TMEM191CA6NGB0 347 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 DFFAO00273 331 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 FPGTO14772 594 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 INSIG1O15503 277 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 SIGLEC6O43699 453 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 LRCH4O75427 683 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 MYBL1P10243 752 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 GZMAP12544 262 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 MIPP30301 263 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 RABIFP47224 123 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 PDE1CQ14123 709 aaPredicted RBP13.82□□□□□ -0.2
PRPF8-202ENST00000571346 NR1I3Q14994 352 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 SMTNL2Q2TAL5 461 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 INO80DQ53TQ3 878 aaPredicted RBP13.82□□□□□ -0.2
PRPF8-202ENST00000571346 ERMARDQ5T6L9 678 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 KDM7AQ6ZMT4 941 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 TTC7BQ86TV6 843 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 VPS36Q86VN1 386 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 ZSCAN30Q86W11 494 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 PARGQ86W56 976 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 PAF1Q8N7H5 531 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 CXorf40AQ8TE69 158 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 FNIP1Q8TF40 1166 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 LRRC19Q9H756 370 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 SP110Q9HB58 689 aa13.82□□□□□ -0.2
PRPF8-202ENST00000571346 MRPL47Q9HD33 250 aaKnown RBP13.82□□□□□ -0.2
PRPF8-202ENST00000571346 IPO11Q9UI26 975 aaKnown RBP13.82□□□□□ -0.2
PRPF8-202ENST00000571346 EIF3CLB5ME19 914 aaKnown RBP13.81□□□□□ -0.2
PRPF8-202ENST00000571346 H3BM21 787 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 J3KR12 359 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 TRIM38O00635 465 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 PRAMEF11O60813 436 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 PIAS2O75928 621 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 ALPPL2P10696 532 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 CKMT2P17540 419 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 DGKAP23743 735 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 PAPOLAP51003 745 aaKnown RBP13.81□□□□□ -0.2
PRPF8-202ENST00000571346 NDST2P52849 883 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 UBASH3AP57075 661 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 FIGNQ5HY92 759 aa13.81□□□□□ -0.2
PRPF8-202ENST00000571346 HES3Q5TGS1 186 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms