RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 ATAT1Q5SQI0 421 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 CES5AQ6NT32 575 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 EP400NLQ6ZTU2 488 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 OTUD6BQ8N6M0 293 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 MRPS31Q92665 395 aaKnown RBP17.55■□□□□ 0.4
RPAIN-208ENST00000571043 MYEOVQ96EZ4 313 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 MRGPRX2Q96LB1 330 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 ZNF599Q96NL3 588 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 FAM111AQ96PZ2 611 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 GCNAQ96QF7 691 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 APOL5Q9BWW9 433 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 FSD1LQ9BXM9 530 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 ZMYND15Q9H091 742 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 RNF38Q9H0F5 515 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 MAGEH1Q9H213 219 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 NT5MQ9NPB1 228 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 CHRAC1Q9NRG0 131 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 NSMCE4AQ9NXX6 385 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 DOCK8Q8NF50 2099 aa17.55■□□□□ 0.4
RPAIN-208ENST00000571043 C2orf78A6NCI8 922 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 PRAMEF11O60813 436 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 STC2O76061 302 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 ITGA2BP08514 1039 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 GJA1P17302 382 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 SLC6A4P31645 630 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 SPRP35270 261 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 CSE1LP55060 971 aaKnown RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 WNT3AP56704 352 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 SLC10A7Q0GE19 358 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 CCDC85BQ15834 202 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 TEDDM1Q5T9Z0 273 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 PDPK2PQ6A1A2 396 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 TXNDC8Q6A555 127 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 CCDC121Q6ZUS5 278 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 CIR1Q86X95 450 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 NDUFAF2Q8N183 169 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 PPHLN1Q8NEY8 458 aaKnown RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 ISL2Q96A47 359 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 TADA1Q96BN2 335 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 MFSD3Q96ES6 412 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 DDX50Q9BQ39 737 aaKnown RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 KLF16Q9BXK1 252 aaPredicted RBP17.54■□□□□ 0.4
RPAIN-208ENST00000571043 KDM4CQ9H3R0 1056 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 ATP13A1Q9HD20 1204 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 PRKAG3Q9UGI9 489 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 PHTF1Q9UMS5 762 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 ARL2BPQ9Y2Y0 163 aa17.54■□□□□ 0.4
RPAIN-208ENST00000571043 CCT8L1PA6NM43 557 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 PMPCBO75439 489 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 CLDN11O75508 207 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 LATS1O95835 1130 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 OLFM2O95897 454 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 DDX6P26196 483 aaKnown RBP eCLIP17.53■□□□□ 0.4
RPAIN-208ENST00000571043 CYP4F8P98187 520 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 RNF187Q5TA31 235 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-208ENST00000571043 TMCO4Q5TGY1 634 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 CGB2Q6NT52 195 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 CDHR3Q6ZTQ4 885 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 CHST9Q7L1S5 443 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 KCNMB4Q86W47 210 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 ZNF354CQ86Y25 554 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 TRIM42Q8IWZ5 723 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 SMRP1Q8NCR6 262 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 RBBP8Q99708 897 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 SLC46A2Q9BY10 475 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 MANSC1Q9H8J5 431 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 C20orf96Q9NUD7 363 aaPredicted RBP17.53■□□□□ 0.4
RPAIN-208ENST00000571043 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 SLC17A6Q9P2U8 582 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 ZMYM5Q9UJ78 669 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 MRPS23Q9Y3D9 190 aaKnown RBP17.53■□□□□ 0.4
RPAIN-208ENST00000571043 TCAF1Q9Y4C2 921 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 PSAT1Q9Y617 370 aa17.53■□□□□ 0.4
RPAIN-208ENST00000571043 KLKB1P03952 638 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 HDCP19113 662 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 NMBRP28336 390 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 CORO1AP31146 461 aaKnown RBP17.52■□□□□ 0.4
RPAIN-208ENST00000571043 ACVRL1P37023 503 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 SERPINB4P48594 390 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 LIMK2P53671 638 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 LBRQ14739 615 aaKnown RBP17.52■□□□□ 0.4
RPAIN-208ENST00000571043 TEAD2Q15562 447 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 DBN1Q16643 649 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 LACTB2Q53H82 288 aaPredicted RBP17.52■□□□□ 0.4
RPAIN-208ENST00000571043 KYAT3Q6YP21 454 aaKnown RBP17.52■□□□□ 0.4
RPAIN-208ENST00000571043 FAM47EQ6ZV65 393 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 DENND1CQ8IV53 801 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.52■□□□□ 0.4
RPAIN-208ENST00000571043 MAB21L3Q8N8X9 362 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 ITFG1Q8TB96 612 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 CCT6BQ92526 530 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 SLC22A12Q96S37 553 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 CYP2S1Q96SQ9 504 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 C12orf65Q9H3J6 166 aaKnown RBP17.52■□□□□ 0.4
RPAIN-208ENST00000571043 TASP1Q9H6P5 420 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 PDFQ9HBH1 243 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 PCMTD2Q9NV79 361 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 CDH22Q9UJ99 828 aa17.52■□□□□ 0.4
RPAIN-208ENST00000571043 STOML2Q9UJZ1 356 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms