RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 BMFQ96LC9 184 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 GDAP1L1Q96MZ0 367 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 KLF6Q99612 283 aaPredicted RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 EIF3CQ99613 913 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 MYOCQ99972 504 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 OSBPL1AQ9BXW6 950 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 DHX35Q9H5Z1 703 aaKnown RBP7.94□□□□□ -1.14
CDH3-209ENST00000569080 CATSPERBQ9H7T0 1116 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 DYRK4Q9NR20 520 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 PCSK1NQ9UHG2 260 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 CAPN11Q9UMQ6 739 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 MFHAS1Q9Y4C4 1052 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 SCINQ9Y6U3 715 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 ZFYVE26Q68DK2 2539 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 APC2O95996 2303 aa7.94□□□□□ -1.14
CDH3-209ENST00000569080 TMEM8BA6NDV4 472 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 POM121BA6NF01 834 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 C16orf96A6NNT2 1141 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 J3KR12 359 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 EEF2KO00418 725 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 KRIT1O00522 736 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 INSIG1O15503 277 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 BUB1O43683 1085 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 THEGLP0DJG4 465 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 GIMD1P0DJR0 217 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ERCC2P18074 760 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 AKT2P31751 481 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 HNRNPH3P31942 346 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 PCK1P35558 622 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ARRB1P49407 418 aaPredicted RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 ACADVLP49748 655 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 DNA2P51530 1060 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 NDST2P52849 883 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 UBASH3AP57075 661 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 RPS21P63220 83 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 ZBED6P86452 979 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 BNIP3Q12983 259 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 SMAD1Q15797 465 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 DPYSL2Q16555 572 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 MYLK3Q32MK0 819 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 INAVAQ3KP66 663 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 TDRD12Q587J7 1177 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 LRRC73Q5JTD7 316 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 TPRG1LQ5T0D9 272 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ERMARDQ5T6L9 678 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 TXNRD3NBQ6F5E7 133 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 CCNI2Q6ZMN8 369 aaPredicted RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 ARHGAP36Q6ZRI8 547 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 TMPRSS7Q7RTY8 843 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ZSCAN30Q86W11 494 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ZSWIM9Q86XI8 627 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 TP53INP2Q8IXH6 220 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 NIPA2Q8N8Q9 360 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ASB12Q8WXK4 309 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 RAB7BQ96AH8 199 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ARHGEF26Q96DR7 871 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 TRIM11Q96F44 468 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 CELF6Q96J87 481 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 NSMCE3Q96MG7 304 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 KLHL32Q96NJ5 620 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 C1QTNF2Q9BXJ5 285 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 SLC39A8Q9C0K1 460 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 THAP2Q9H0W7 228 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 CWC15Q9P013 229 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 IFNKQ9P0W0 207 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 DKK3Q9UBP4 350 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 FTSJ1Q9UET6 329 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 ZMIZ1Q9ULJ6 1067 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 HPCAL4Q9UM19 191 aa7.93□□□□□ -1.14
CDH3-209ENST00000569080 APOBEC2Q9Y235 224 aaKnown RBP7.93□□□□□ -1.14
CDH3-209ENST00000569080 IGLON5A6NGN9 336 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 A6NNZ2 444 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 MUSKO15146 869 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 TSPAN6O43657 245 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 PRPSAP2O60256 369 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 MAGEC1O60732 1142 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 SDC3O75056 442 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 PCDH8O95206 1070 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 PIGNO95427 931 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 POP4O95707 220 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 IGSF6O95976 241 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 PEX11BO96011 259 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 SERPING1P05155 500 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 CYP1A2P05177 515 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 ITGAVP06756 1048 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 DESP17661 470 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 ITIH2P19823 946 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 IGFALSP35858 605 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 HCAR3P49019 387 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 PAPOLAP51003 745 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 PFN3P60673 137 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 RHOAP61586 193 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 DNAJC3Q13217 504 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 CAMK2BQ13554 666 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 FZD2Q14332 565 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 STAT4Q14765 748 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 ACAP1Q15027 740 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 SMTNL2Q2TAL5 461 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms