RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 SCINQ9Y6U3 715 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 FAM169AQ9Y6X4 670 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 USP34Q70CQ2 3546 aa5.51□□□□□ -1.53
CAPN3-217ENST00000567817 GBF1Q92538 1859 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 C5orf60A6NFR6 353 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ZSCAN5CA6NGD5 496 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 NPIPB8E9PQR5 432 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 MYO1FO00160 1098 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 VWA5AO00534 786 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 SLC16A4O15374 487 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RGS16O15492 202 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 TRAPPC3O43617 180 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 DNAJC6O75061 913 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 LSM8O95777 96 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 GASTP01350 101 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 SUPT20HL2P0C7V6 817 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 GHRP10912 638 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CRHR1P34998 444 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 COILP38432 576 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 NAMPTP43490 491 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 NSFP46459 744 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 LIG4P49917 911 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 PEX5P50542 639 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RNASE9P60153 205 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 DGCR2P98153 550 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FMO1Q01740 532 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 MCL1Q07820 350 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 PDCLQ13371 301 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ITIH4Q14624 930 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 KCTD2Q14681 263 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 PSMD6Q15008 389 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 PPP1R7Q15435 360 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 MUM1Q2TAK8 710 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ANO4Q32M45 955 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 C1orf220Q5T0J3 134 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 DCAF12L1Q5VU92 463 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 KCTD16Q68DU8 428 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC137Q6PK04 289 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 C15orf39Q6ZRI6 1047 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 C10orf67Q8IYJ2 551 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC105Q8IYK2 499 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CPXCR1Q8N123 301 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RIBC1Q8N443 379 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 PRELID2Q8N945 189 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC89Q8N998 374 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 PRSS33Q8NF86 280 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 MYCBPAPQ8TBZ2 947 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 IPO4Q8TEX9 1081 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ATP8B4Q8TF62 1192 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF473Q8WTR7 871 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 TSPEARQ8WU66 669 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ARNTL2Q8WYA1 636 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 POMGNT1Q8WZA1 660 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 TLCD1Q96CP7 247 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ARHGEF26Q96DR7 871 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FAM167AQ96KS9 214 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CCT8L2Q96SF2 557 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 JPH2Q9BR39 696 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC77Q9BR77 488 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CPPED1Q9BRF8 314 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 NUP85Q9BW27 656 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FAM126AQ9BYI3 521 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FRMD8P1Q9BZ68 369 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 IMPG2Q9BZV3 1241 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ZNF518BQ9C0D4 1074 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 QRSL1Q9H0R6 528 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 UPF3AQ9H1J1 476 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FAM124BQ9H5Z6 455 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CCDC134Q9H6E4 229 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RPAP3Q9H6T3 665 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ACAD9Q9H845 621 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RAVER2Q9HCJ3 691 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ZDHHC18Q9NUE0 388 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FBXO28Q9NVF7 368 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 COL20A1Q9P218 1284 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 SLC9A2Q9UBY0 812 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CNOT8Q9UFF9 292 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 ADAMTS5Q9UNA0 930 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 WDFY4Q6ZS81 3184 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 FAM186AA6NE01 2351 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 RIF1Q5UIP0 2472 aaKnown RBP5.5□□□□□ -1.53
CAPN3-217ENST00000567817 CHD8Q9HCK8 2581 aa5.5□□□□□ -1.53
CAPN3-217ENST00000567817 REV3LO60673 3130 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 LOC102724159A0A0B4J2E5 919 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 E7EVH7 732 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 H0YHG0 523 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 ASAP2O43150 1006 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 ITGA10O75578 1167 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 TCEA3O75764 348 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 CCNE2O96020 404 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 ASGR1P07306 291 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 ADRB2P07550 413 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 GSTA1P08263 222 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 TGFB3P10600 412 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 MYCLP12524 364 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-217ENST00000567817 UNGP13051 313 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-217ENST00000567817 KCNA2P16389 499 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 CHRNB2P17787 502 aa5.49□□□□□ -1.53
CAPN3-217ENST00000567817 KCNA5P22460 613 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms