RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 ANKRD20A12PQ8NF67 263 aa24.1■■□□□ 1.45
RAB40C-209ENST00000565511 FEM1CQ96JP0 617 aa24.1■■□□□ 1.45
RAB40C-209ENST00000565511 RETREG1Q9H6L5 497 aa24.1■■□□□ 1.45
RAB40C-209ENST00000565511 HS3ST3A1Q9Y663 406 aa24.1■■□□□ 1.45
RAB40C-209ENST00000565511 LOC400499M0QZD8 3231 aa24.1■■□□□ 1.45
RAB40C-209ENST00000565511 RASA4BC9J798 803 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 RASA4O43374 803 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 BUB1O43683 1085 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 TLX3O43711 291 aaPredicted RBP24.09■■□□□ 1.45
RAB40C-209ENST00000565511 CREB3O43889 395 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 CDK11BP21127 795 aaKnown RBP24.09■■□□□ 1.45
RAB40C-209ENST00000565511 ACAD10Q6JQN1 1059 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 PDZD3Q86UT5 571 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 RFFLQ8WZ73 363 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 DNAJC28Q9NX36 388 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 LHX3Q9UBR4 397 aa24.09■■□□□ 1.45
RAB40C-209ENST00000565511 PNMA8BQ9ULN7 279 aaPredicted RBP24.09■■□□□ 1.45
RAB40C-209ENST00000565511 ANKRD36A6QL64 1941 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 SMG1Q96Q15 3661 aaKnown RBP24.08■■□□□ 1.45
RAB40C-209ENST00000565511 AREL1O15033 823 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 HNF1BP35680 557 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 GEMIN4P57678 1058 aaKnown RBP24.08■■□□□ 1.45
RAB40C-209ENST00000565511 SNRPD1P62314 119 aaKnown RBP24.08■■□□□ 1.45
RAB40C-209ENST00000565511 ILKQ13418 452 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 CA9Q16790 459 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 ZNF354CQ86Y25 554 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 ARFGAP1Q8N6T3 406 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 EXOC2Q96KP1 924 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 CNPY3Q9BT09 278 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 TRIM7Q9C029 511 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 HPCAL4Q9UM19 191 aa24.08■■□□□ 1.45
RAB40C-209ENST00000565511 SPTY2D1-AS1A0A0U1RR47 76 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 WASH4PA8MWX3 477 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 TMCO5BA8MYB1 307 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 TSPAN6O43657 245 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 POP4O95707 220 aaKnown RBP24.07■■□□□ 1.44
RAB40C-209ENST00000565511 FERP16591 822 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 IGFALSP35858 605 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 EIF2B5Q13144 721 aaKnown RBP24.07■■□□□ 1.44
RAB40C-209ENST00000565511 SERINC3Q13530 473 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 CYTH1Q15438 398 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 ANO6Q4KMQ2 910 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 ZNF548Q8NEK5 533 aaPredicted RBP24.07■■□□□ 1.44
RAB40C-209ENST00000565511 NXPE2Q96DL1 559 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 LRIG1Q96JA1 1093 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 GDAP1L1Q96MZ0 367 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 LENG8Q96PV6 779 aaPredicted RBP24.07■■□□□ 1.44
RAB40C-209ENST00000565511 PEBP4Q96S96 227 aa24.07■■□□□ 1.44
RAB40C-209ENST00000565511 TCEAL2Q9H3H9 227 aaPredicted RBP24.07■■□□□ 1.44
RAB40C-209ENST00000565511 K7ESM1 405 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 PIGNO95427 931 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 CDK4P11802 303 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 PFN3P60673 137 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 DAB2P98082 770 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 PDE1CQ14123 709 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-209ENST00000565511 GDPD4Q6W3E5 623 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 RAB7BQ96AH8 199 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 IFT43Q96FT9 208 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 APOLD1Q96LR9 279 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 TTYH3Q9C0H2 523 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 PDFQ9HBH1 243 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 SCUBE2Q9NQ36 999 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 RTN4Q9NQC3 1192 aaKnown RBP24.06■■□□□ 1.44
RAB40C-209ENST00000565511 PTPRQQ9UMZ3 2332 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 LRP4O75096 1905 aa24.06■■□□□ 1.44
RAB40C-209ENST00000565511 BAHCC1Q9P281 2608 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 RP1P56715 2156 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 A0A087WV48 116 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 LRRC53A6NM62 1247 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 NEMP1O14524 444 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 MMP20O60882 483 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 CSF2P04141 144 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 CKMT1AP12532 417 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 NME1P15531 152 aaKnown RBP24.05■■□□□ 1.44
RAB40C-209ENST00000565511 TIMP2P16035 220 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 RHOAP61586 193 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 SEMG2Q02383 582 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 MAMLD1Q13495 774 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 CYP4V2Q6ZWL3 525 aaPredicted RBP24.05■■□□□ 1.44
RAB40C-209ENST00000565511 RBFAQ8N0V3 343 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 UMODL1-AS1Q8N2C9 162 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 DCBLD1Q8N8Z6 715 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 CENPTQ96BT3 561 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 CELF6Q96J87 481 aaKnown RBP24.05■■□□□ 1.44
RAB40C-209ENST00000565511 EPAS1Q99814 870 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 OSBPL1AQ9BXW6 950 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 LRRC19Q9H756 370 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 MBNL1Q9NR56 388 aaKnown RBP24.05■■□□□ 1.44
RAB40C-209ENST00000565511 NLGN3Q9NZ94 848 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 PCDHB1Q9Y5F3 818 aa24.05■■□□□ 1.44
RAB40C-209ENST00000565511 FASNP49327 2511 aaKnown RBP24.05■■□□□ 1.44
RAB40C-209ENST00000565511 ZSCAN5CA6NGD5 496 aaPredicted RBP24.04■■□□□ 1.44
RAB40C-209ENST00000565511 J3KR12 359 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 FPGTO14772 594 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 SCAMP1O15126 338 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 IGSF6O95976 241 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 RABIFP47224 123 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 SGCGQ13326 291 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 RTP5Q14D33 572 aa24.04■■□□□ 1.44
RAB40C-209ENST00000565511 PLEKHA7Q6IQ23 1121 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms