RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SERINC2Q96SA4 455 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 C12orf57Q99622 126 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF251Q9BRH9 671 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 TMEM121Q9BTD3 319 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 CCDC32Q9BV29 185 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 GTPBP2Q9BX10 602 aaKnown RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 LSM14BQ9BX40 385 aaKnown RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 IDI2Q9BXS1 227 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 CELF4Q9BZC1 486 aaKnown RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 NMUR2Q9GZQ4 415 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 TWSG1Q9GZX9 223 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 LDAHQ9H6V9 325 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 SLCO1B3Q9NPD5 702 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 SLC35C2Q9NQQ7 365 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 TMEM39AQ9NV64 488 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 MED9Q9NWA0 146 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 MTRRQ9UBK8 725 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 CYB5R1Q9UHQ9 305 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 SERPINB13Q9UIV8 391 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 PRR12Q9ULL5 1215 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 PNMA8BQ9ULN7 279 aaPredicted RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 CDC14AQ9UNH5 594 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 ACOT9Q9Y305 439 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 PLLPQ9Y342 182 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 PCDHB3Q9Y5E6 796 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 FKBP7Q9Y680 259 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 CDY2AQ9Y6F7 541 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 MYO5BQ9ULV0 1848 aa6.36□□□□□ -1.39
PTPN9-204ENST00000564970 AHDC1Q5TGY3 1603 aaPredicted RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 COL22A1Q8NFW1 1626 aaPredicted RBP6.36□□□□□ -1.39
PTPN9-204ENST00000564970 SLIT1O75093 1534 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 COL15A1P39059 1388 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 HEG1Q9ULI3 1381 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 MYH4Q9Y623 1939 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ATAD5Q96QE3 1844 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 KRBOX1C9JBD0 128 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 H0Y626 953 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 H0YAE9 185 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SNAP23O00161 211 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 AURKAO14965 403 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TBX3O15119 743 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 DDX3YO15523 660 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 HS6ST1O60243 411 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 FZD6O60353 706 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 UGT2B11O75310 529 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 UGT2B17O75795 530 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 DGAT1O75907 488 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 BCAS2O75934 225 aaPredicted RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SEMA3DO95025 777 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PIGNO95427 931 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ACSL3O95573 720 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 DHFRP00374 187 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 GOT2P00505 430 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CDK1P06493 297 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 S100A9P06702 114 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ANXA6P08133 673 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 HOXD4P09016 255 aaPredicted RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 HSMCR30P0CW71 290 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SAGP10523 405 aaPredicted RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CYP2A7P20853 494 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ZP3P21754 424 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 OSBPP22059 807 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 KELP23276 732 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 GABRB3P28472 473 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 GCAP28676 217 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 NOS3P29474 1203 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SOX6P35712 828 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CPT1AP50416 773 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TOB1P50616 345 aaPredicted RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 UGT2B15P54855 530 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 C21orf58P58505 322 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 RNASE9P60153 205 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 RNF4P78317 190 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 RBP5P82980 135 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 MPP1Q00013 466 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CNTN2Q02246 1040 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CENPCQ03188 943 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PCDH1Q08174 1060 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SF3A3Q12874 501 aaKnown RBP eCLIP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 GRM1Q13255 1194 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 LAMC2Q13753 1193 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 COTL1Q14019 142 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 IKBKEQ14164 716 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SIM2Q14190 667 aaPredicted RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CAPRIN1Q14444 709 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 STARD3Q14849 445 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TMED2Q15363 201 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SLC14A2Q15849 920 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 GRIK4Q16099 956 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 EXOC3L4Q17RC7 722 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PGS1Q32NB8 556 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SPATS1Q496A3 300 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 RBM48Q5RL73 367 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PERM1Q5SV97 790 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 IFIT1BQ5T764 474 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ATF7IP2Q5U623 682 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TYW3Q6IPR3 259 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms