RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 V9GYQ6 96 aa12.48□□□□□ -0.41
SCAMP2-204ENST00000563829 LRRIQ4A6NIV6 560 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 YBX3P16989 372 aaKnown RBP eCLIP12.47□□□□□ -0.413e-7■□□□□ 9.4
SCAMP2-204ENST00000563829 TGM2P21980 687 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 ALDH4A1P30038 563 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 BMPR1AP36894 532 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TNFSF9P41273 254 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 CDH8P55286 799 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 COPZ1P61923 177 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 MPP1Q00013 466 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 KRT76Q01546 638 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 CBLBQ13191 982 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 PPP1R3AQ16821 1122 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 GRTP1Q5TC63 336 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 BROXQ5VW32 411 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 FAM219BQ5XKK7 198 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TMC5Q6UXY8 1006 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 CYS1Q717R9 158 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 CDKL3Q8IVW4 592 aaPredicted RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 SFRP1Q8N474 314 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 SPATA6LQ8N4H0 392 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 HDAC10Q969S8 669 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 SPATA17Q96L03 361 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 MUS81Q96NY9 551 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 RBBP8Q99708 897 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 MAGEB5Q9BZ81 275 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 HOXD1Q9GZZ0 328 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 CD320Q9NPF0 282 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 AGPAT4Q9NRZ5 378 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 SEPT9Q9UHD8 586 aaPredicted RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 ILVBLA1L0T0 632 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 NFIBO00712 420 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 H2AFYO75367 372 aaKnown RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 FARP2O94887 1054 aaPredicted RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 POLBP06746 335 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 GPD1P21695 349 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 PSMA4P25789 261 aaKnown RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TUFMP49411 452 aaKnown RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 XAF1Q6GPH4 301 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TRNP1Q6NT89 227 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 PEX5LQ8IYB4 626 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 ELMOD1Q8N336 334 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 HMGCLL1Q8TB92 370 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 UBA3Q8TBC4 463 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TMEM143Q96AN5 459 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 ZNF669Q96BR6 464 aaPredicted RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 LRCH3Q96II8 777 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TRIM8Q9BZR9 551 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 TRIT1Q9H3H1 467 aaKnown RBP12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 RMND5AQ9H871 391 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 SEPT10Q9P0V9 454 aa12.47□□□□□ -0.41
SCAMP2-204ENST00000563829 MAN1A2O60476 641 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 USP12O75317 370 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 GPC4O75487 556 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 GABBR2O75899 941 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 HNRNPLP14866 589 aaKnown RBP eCLIP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 MAGP20916 626 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 RPS9P46781 194 aaKnown RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 LEPRP48357 1165 aaKnown RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 PSMD8P48556 350 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 ZNF143P52747 638 aaPredicted RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 ZBTB33Q86T24 672 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 IQCF2Q8IXL9 164 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 PARP8Q8N3A8 854 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 OR7G1Q8NGA0 311 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 CENPNQ96H22 339 aaPredicted RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 CPB2Q96IY4 423 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 EPS8L2Q9H6S3 715 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 AKIP1Q9NQ31 210 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 TBC1D13Q9NVG8 400 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 PRELID1Q9Y255 219 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 SDHDO14521 159 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 ASNA1O43681 348 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 HSPA1AP0DMV8 641 aaKnown RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 HSPA1BP0DMV9 641 aaKnown RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 CCT8P50990 548 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 TFAMQ00059 246 aaKnown RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 SEMA5AQ13591 1074 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 INPP5AQ14642 412 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 ATP6AP1Q15904 470 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 Q3C1V9 767 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 IFNEQ86WN2 208 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 COLGALT1Q8NBJ5 622 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 DUS3LQ96G46 650 aaKnown RBP12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 TSNARE1Q96NA8 513 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 CNPY3Q9BT09 278 aa12.46□□□□□ -0.41
SCAMP2-204ENST00000563829 GREB1LQ9C091 1923 aaPredicted RBP12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 CCDC78A2IDD5 438 aa12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 SLCO1B7G3V0H7 640 aa12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 K7ERI5 159 aa12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 TNPO2O14787 897 aaKnown RBP12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 SNPHO15079 494 aa12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 ACOX3O15254 700 aa12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 RASAL1O95294 804 aa12.46□□□□□ -0.42
SCAMP2-204ENST00000563829 ATG7O95352 703 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms