RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 AP1G1O43747 822 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 GJB6O95452 261 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 PAK4O96013 591 aaPredicted RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 MT-CO1P00395 513 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 NTRK1P04629 796 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 GLI1P08151 1106 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 PRCPP42785 496 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 NEK3P51956 506 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CDH4P55283 916 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CDK17Q00537 523 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 GCNT1Q02742 428 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CENPCQ03188 943 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 LRRC63Q05C16 580 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CETN1Q12798 172 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 EIF3IQ13347 325 aaKnown RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 AUHQ13825 339 aaKnown RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 SPIDRQ14159 915 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 NR0B2Q15466 257 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 DEFB133Q30KQ1 61 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 C5orf22Q49AR2 442 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 ZNF542PQ5EBM4 170 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 EFHC1Q5JVL4 640 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 SEL1L3Q68CR1 1132 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 ANKRD40Q6AI12 368 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 OR6B2Q6IFH4 312 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 ATG14Q6ZNE5 492 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CD163Q86VB7 1156 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 SMYD4Q8IYR2 804 aaPredicted RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 OR52K2Q8NGK3 314 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 NAT6Q93015 286 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 ARRDC3Q96B67 414 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 LIN37Q96GY3 246 aaPredicted RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 CCDC34Q96HJ3 373 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 TBATAQ96M53 351 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 LENG8Q96PV6 779 aaPredicted RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 SEMA3CQ99985 751 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 MUC3BQ9H195 1237 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CAAP1Q9H8G2 361 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 FAM204AQ9H8W3 233 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 STARD5Q9NSY2 213 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 RMND1Q9NWS8 449 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 DDIT4Q9NX09 232 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 IL36AQ9UHA7 158 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 IPO11Q9UI26 975 aaKnown RBP6.56□□□□□ -1.36
USP8-213ENST00000560885 KLF15Q9UIH9 416 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 ACSL6Q9UKU0 697 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 VANGL2Q9ULK5 521 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CNTN6Q9UQ52 1028 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 PCDHGA7Q9Y5G6 932 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CENPEQ02224 2701 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 CHD5Q8TDI0 1954 aa6.56□□□□□ -1.36
USP8-213ENST00000560885 LRRK1Q38SD2 2015 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 PMS2P1A4D2B8 440 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 LMO7DNF2Z398 122 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 TMX2-CTNND1H3BSU7 103 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 NTN3O00634 580 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 PLD2O14939 933 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 MUSKO15146 869 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 SMAD6O43541 496 aaKnown RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 LEFTY1O75610 366 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ZNF202O95125 648 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 CALCAP01258 141 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 AFPP02771 609 aaKnown RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 CENPBP07199 599 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 HSP90AA1P07900 732 aaKnown RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 KRT10P13645 584 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ADRB3P13945 408 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 RRM1P23921 792 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ITGB7P26010 798 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 L1CAMP32004 1257 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 RECQLP46063 649 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 PDX1P52945 283 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 PITX1P78337 314 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 SGCGQ13326 291 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 PDE1CQ14123 709 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 PTK2BQ14289 1009 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 TAF5Q15542 800 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 LINC00303Q3SY05 128 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 COLEC12Q5KU26 742 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ACBD5Q5T8D3 534 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 ZNF658Q5TYW1 1059 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 DENND1BQ6P3S1 775 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ZNF574Q6ZN55 896 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 USP53Q70EK8 1073 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 C14orf80Q86SX3 495 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 SETD3Q86TU7 594 aaPredicted RBP6.55□□□□□ -1.36
USP8-213ENST00000560885 LURAP1LQ8IV03 231 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 LMO3Q8TAP4 145 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 GRIN3AQ8TCU5 1115 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 LMX1AQ8TE12 382 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ZNF606Q8WXB4 792 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 ASB12Q8WXK4 309 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 KAT5Q92993 513 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 SGF29Q96ES7 293 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 GSDMAQ96QA5 445 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 SLC2A13Q96QE2 648 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 PSMB7Q99436 277 aa6.55□□□□□ -1.36
USP8-213ENST00000560885 KLF6Q99612 283 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms