RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 OR7D4Q8NG98 312 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 SNIP1Q8TAD8 396 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 GRIN3AQ8TCU5 1115 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 ISG20Q96AZ6 181 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 ALS2CR12Q96Q35 445 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 NAPGQ99747 312 aaPredicted RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 CALN1Q9BXU9 219 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 STK33Q9BYT3 514 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 USP29Q9HBJ7 922 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 SNX10Q9Y5X0 201 aa13.82□□□□□ -0.2
SMAD3-214ENST00000560402 SMG1Q96Q15 3661 aaKnown RBP13.82□□□□□ -0.2
SMAD3-214ENST00000560402 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 EPHB6O15197 1021 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 SIGLEC6O43699 453 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 SDC3O75056 442 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 LEFTY1O75610 366 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 ZMPSTE24O75844 475 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 PIAS2O75928 621 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 ENDOD1O94919 500 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 PCDH8O95206 1070 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 LCA5LO95447 670 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 MMEP08473 750 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 ADRB3P13945 408 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 DGKAP23743 735 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 MAGEA1P43355 309 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 MAPKAPK2P49137 400 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 HNRNPKP61978 463 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMAD3-214ENST00000560402 RPS21P63220 83 aaKnown RBP13.81□□□□□ -0.2
SMAD3-214ENST00000560402 TUBB4BP68371 445 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 GNA12Q03113 381 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 SOWAHCQ53LP3 525 aaPredicted RBP13.81□□□□□ -0.2
SMAD3-214ENST00000560402 TAF3Q5VWG9 929 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 LINGO4Q6UY18 593 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 TRIM72Q6ZMU5 477 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 LRRC69Q6ZNQ3 347 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 NOP9Q86U38 636 aaKnown RBP13.81□□□□□ -0.2
SMAD3-214ENST00000560402 DCBLD1Q8N8Z6 715 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 RAB7BQ96AH8 199 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 LRIG1Q96JA1 1093 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 CFAP57Q96MR6 1250 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 MYOCQ99972 504 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 HEPHQ9BQS7 1158 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 DUSP23Q9BVJ7 150 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 TNKS2Q9H2K2 1166 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 L2HGDHQ9H9P8 463 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 METTL5Q9NRN9 209 aaKnown RBP13.81□□□□□ -0.2
SMAD3-214ENST00000560402 GPR27Q9NS67 375 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 NLGN3Q9NZ94 848 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 ZFR2Q9UPR6 939 aaKnown RBP13.81□□□□□ -0.2
SMAD3-214ENST00000560402 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 CA5BQ9Y2D0 317 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 HS3ST3A1Q9Y663 406 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 AK5Q9Y6K8 562 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 WASF2Q9Y6W5 498 aa13.81□□□□□ -0.2
SMAD3-214ENST00000560402 NEMP2A6NFY4 417 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 H3BM21 787 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 RRP8O43159 456 aaKnown RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 SRGAP2O75044 1071 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 GP1BAP07359 652 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 GLDCP23378 1020 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 SDC4P31431 198 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 L1CAMP32004 1257 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 CCNHP51946 323 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 CLDN6P56747 220 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 GSCP56915 257 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 ARF5P84085 180 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 INSM1Q01101 510 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 CARD16Q5EG05 197 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 ARSIQ5FYB1 569 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 ARTNQ5T4W7 220 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 MANEALQ5VSG8 457 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 NAA35Q5VZE5 725 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 TRNP1Q6NT89 227 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 STRADAQ7RTN6 431 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 PTAR1Q7Z6K3 402 aaPredicted RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 DENND6BQ8NEG7 585 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 DCBLD2Q96PD2 775 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 SPON2Q9BUD6 331 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 TMPRSS4Q9NRS4 437 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
SMAD3-214ENST00000560402 GUCA1BQ9UMX6 200 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 PCDHA13Q9Y5I0 950 aa13.8□□□□□ -0.2
SMAD3-214ENST00000560402 TRIM38O00635 465 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 ZNF821O75541 412 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-214ENST00000560402 CYP1A1P04798 512 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-214ENST00000560402 CKMT1AP12532 417 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 RHOQP17081 205 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 MMP8P22894 467 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 EIF2S3P41091 472 aaKnown RBP13.79□□□□□ -0.2
SMAD3-214ENST00000560402 PRKCIP41743 596 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 PTPN9P43378 593 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 RABIFP47224 123 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 DUSP3P51452 185 aaPredicted RBP13.79□□□□□ -0.2
SMAD3-214ENST00000560402 CDR2Q01850 454 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 SLC18A3Q16572 532 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 SEL1L3Q68CR1 1132 aa13.79□□□□□ -0.2
SMAD3-214ENST00000560402 PARS2Q7L3T8 475 aaKnown RBP13.79□□□□□ -0.2
SMAD3-214ENST00000560402 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms