RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 NXPH1P58417 271 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 DPYSQ14117 519 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 DPYSL2Q16555 572 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 SLC18A3Q16572 532 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 ST3GAL2Q16842 350 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
LRRC28-214ENST00000559433 BOLA3Q53S33 107 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 AFMIDQ63HM1 303 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 SEL1L3Q68CR1 1132 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 GDPD4Q6W3E5 623 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 NPWQ8N729 165 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 MFSD2AQ8NA29 543 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-214ENST00000559433 FEM1CQ96JP0 617 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 EXOC2Q96KP1 924 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 KLHL32Q96NJ5 620 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 ELF4Q99607 663 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-214ENST00000559433 SCNM1Q9BWG6 230 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 SP110Q9HB58 689 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 PDFQ9HBH1 243 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 FZD3Q9NPG1 666 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 LHX3Q9UBR4 397 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 ZFR2Q9UPR6 939 aaKnown RBP12.77□□□□□ -0.37
LRRC28-214ENST00000559433 FADS3Q9Y5Q0 445 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.37
LRRC28-214ENST00000559433 A0A1B0GTQ1 180 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 YKT6O15498 198 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 INSIG1O15503 277 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 AP1G1O43747 822 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 HYAL3O43820 417 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-214ENST00000559433 PCDHGA12O60330 932 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 CBFA2T3O75081 653 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 MFAP3LO75121 409 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 RARAP10276 462 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 SPINK2P20155 84 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 HNRNPA2B1P22626 353 aaKnown RBP12.76□□□□□ -0.37
LRRC28-214ENST00000559433 AKT2P31751 481 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 ABL2P42684 1182 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 RPS21P63220 83 aaKnown RBP12.76□□□□□ -0.37
LRRC28-214ENST00000559433 SLC25A11Q02978 314 aaKnown RBP12.76□□□□□ -0.37
LRRC28-214ENST00000559433 OVGP1Q12889 678 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 SGCGQ13326 291 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 CYTH1Q15438 398 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 TMEM259Q4ZIN3 620 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 PRAMEF14Q5SWL7 426 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 KIAA1161Q6NSJ0 714 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 IQCHQ86VS3 1027 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 ARHGAP12Q8IWW6 846 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 CHCHD4Q8N4Q1 142 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 OXR1Q8N573 874 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 TMEM145Q8NBT3 493 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 TEKT4Q8WW24 435 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 CTNNBL1Q8WYA6 563 aaPredicted RBP12.76□□□□□ -0.37
LRRC28-214ENST00000559433 RAB7BQ96AH8 199 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 KLHDC7BQ96G42 594 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 ABHD10Q9NUJ1 306 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 CTTNBP2NLQ9P2B4 639 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 ITM2BQ9Y287 266 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 BTBD3Q9Y2F9 522 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 LRRK1Q38SD2 2015 aa12.76□□□□□ -0.37
LRRC28-214ENST00000559433 SSU72P8A0A1W2PR75 194 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 TSPAN6O43657 245 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 AKR1B10O60218 316 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 PALMO75781 387 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 PIGNO95427 931 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 FTH1P19P0C7X4 201 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 COL5A1P20908 1838 aaPredicted RBP12.75□□□□□ -0.37
LRRC28-214ENST00000559433 GJC1P36383 396 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 ADKP55263 362 aaKnown RBP12.75□□□□□ -0.37
LRRC28-214ENST00000559433 KRT81Q14533 505 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 HADHQ16836 314 aaKnown RBP12.75□□□□□ -0.37
LRRC28-214ENST00000559433 HS1BP3Q53T59 392 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 CCDC157Q569K6 752 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 LRRC73Q5JTD7 316 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 TXNRD3NBQ6F5E7 133 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 TMCO3Q6UWJ1 677 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 DBX2Q6ZNG2 339 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 ARHGAP36Q6ZRI8 547 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 POLNQ7Z5Q5 900 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 SPATS2Q86XZ4 545 aaKnown RBP12.75□□□□□ -0.37
LRRC28-214ENST00000559433 GATAD2AQ86YP4 633 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 PNPLA1Q8N8W4 532 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 BAHD1Q8TBE0 780 aaPredicted RBP12.75□□□□□ -0.37
LRRC28-214ENST00000559433 VOPP1Q96AW1 172 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 CINPQ9BW66 212 aaPredicted RBP12.75□□□□□ -0.37
LRRC28-214ENST00000559433 PACSIN1Q9BY11 444 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 ERVMER34-1Q9H9K5 563 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 PCDH18Q9HCL0 1135 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 UVRAGQ9P2Y5 699 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 FTSJ1Q9UET6 329 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 GGT7Q9UJ14 662 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 MFHAS1Q9Y4C4 1052 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 NEUROG3Q9Y4Z2 214 aa12.75□□□□□ -0.37
LRRC28-214ENST00000559433 TDRD6O60522 2096 aaKnown RBP12.74□□□□□ -0.37
LRRC28-214ENST00000559433 SPINT1O43278 529 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 TNFSF14O43557 240 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 PROSCO94903 275 aa12.74□□□□□ -0.37
LRRC28-214ENST00000559433 TOP3BO95985 862 aaKnown RBP12.74□□□□□ -0.37
LRRC28-214ENST00000559433 H2AFZP0C0S5 128 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms