RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 HSPH1Q92598 858 aa8.8□□□□□ -1
USP3-208ENST00000558285 SERAC1Q96JX3 654 aa8.8□□□□□ -1
USP3-208ENST00000558285 TUBGCP5Q96RT8 1024 aa8.8□□□□□ -1
USP3-208ENST00000558285 PSMB7Q99436 277 aa8.8□□□□□ -1
USP3-208ENST00000558285 CDC6Q99741 560 aa8.8□□□□□ -1
USP3-208ENST00000558285 MAK16Q9BXY0 300 aaKnown RBP8.8□□□□□ -1
USP3-208ENST00000558285 ANLNQ9NQW6 1124 aa8.8□□□□□ -1
USP3-208ENST00000558285 TMPRSS4Q9NRS4 437 aa8.8□□□□□ -1
USP3-208ENST00000558285 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.8□□□□□ -1
USP3-208ENST00000558285 DNAAF2Q9NVR5 837 aaKnown RBP8.8□□□□□ -1
USP3-208ENST00000558285 SEPT3Q9UH03 358 aa8.8□□□□□ -1
USP3-208ENST00000558285 CKAP5Q14008 2032 aa8.8□□□□□ -1
USP3-208ENST00000558285 THADAQ6YHU6 1953 aa8.8□□□□□ -1
USP3-208ENST00000558285 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.8□□□□□ -1
USP3-208ENST00000558285 DFFAO00273 331 aa8.8□□□□□ -1
USP3-208ENST00000558285 VILLO15195 856 aa8.8□□□□□ -1
USP3-208ENST00000558285 FLRT2O43155 660 aa8.8□□□□□ -1
USP3-208ENST00000558285 AP1G1O43747 822 aa8.8□□□□□ -1
USP3-208ENST00000558285 PALMO75781 387 aa8.8□□□□□ -1
USP3-208ENST00000558285 ZMPSTE24O75844 475 aa8.8□□□□□ -1
USP3-208ENST00000558285 PROSCO94903 275 aa8.8□□□□□ -1
USP3-208ENST00000558285 CDK4P11802 303 aa8.8□□□□□ -1
USP3-208ENST00000558285 ZFXP17010 805 aaPredicted RBP8.8□□□□□ -1
USP3-208ENST00000558285 CES1P23141 567 aa8.8□□□□□ -1
USP3-208ENST00000558285 SERPINA4P29622 427 aa8.8□□□□□ -1
USP3-208ENST00000558285 CETN2P41208 172 aa8.8□□□□□ -1
USP3-208ENST00000558285 ZNF75DP51815 510 aa8.8□□□□□ -1
USP3-208ENST00000558285 ARF5P84085 180 aa8.8□□□□□ -1
USP3-208ENST00000558285 IL10RBQ08334 325 aa8.8□□□□□ -1
USP3-208ENST00000558285 CNTN1Q12860 1018 aa8.8□□□□□ -1
USP3-208ENST00000558285 GRIK2Q13002 908 aa8.8□□□□□ -1
USP3-208ENST00000558285 SEMA3BQ13214 749 aa8.8□□□□□ -1
USP3-208ENST00000558285 SERINC3Q13530 473 aa8.8□□□□□ -1
USP3-208ENST00000558285 ZNF235Q14590 738 aa8.8□□□□□ -1
USP3-208ENST00000558285 MYLK3Q32MK0 819 aa8.8□□□□□ -1
USP3-208ENST00000558285 ARSIQ5FYB1 569 aa8.8□□□□□ -1
USP3-208ENST00000558285 RALGPS1Q5JS13 557 aa8.8□□□□□ -1
USP3-208ENST00000558285 TCEAL6Q6IPX3 200 aa8.8□□□□□ -1
USP3-208ENST00000558285 TIGD7Q6NT04 549 aaPredicted RBP8.8□□□□□ -1
USP3-208ENST00000558285 DPY19L3Q6ZPD9 716 aa8.8□□□□□ -1
USP3-208ENST00000558285 BZW1Q7L1Q6 419 aaKnown RBP8.8□□□□□ -1
USP3-208ENST00000558285 POLNQ7Z5Q5 900 aa8.8□□□□□ -1
USP3-208ENST00000558285 ATPAF2Q8N5M1 289 aa8.8□□□□□ -1
USP3-208ENST00000558285 MFSD2AQ8NA29 543 aa8.8□□□□□ -1
USP3-208ENST00000558285 ATL2Q8NHH9 583 aa8.8□□□□□ -1
USP3-208ENST00000558285 GLMNQ92990 594 aa8.8□□□□□ -1
USP3-208ENST00000558285 TCEAL3Q969E4 200 aa8.8□□□□□ -1
USP3-208ENST00000558285 MRFAP1L1Q96HT8 127 aa8.8□□□□□ -1
USP3-208ENST00000558285 ZNF641Q96N77 438 aaPredicted RBP8.8□□□□□ -1
USP3-208ENST00000558285 FERMT1Q9BQL6 677 aa8.8□□□□□ -1
USP3-208ENST00000558285 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
USP3-208ENST00000558285 CPEB1Q9BZB8 566 aaKnown RBP8.8□□□□□ -1
USP3-208ENST00000558285 TNKS2Q9H2K2 1166 aa8.8□□□□□ -1
USP3-208ENST00000558285 SMOC1Q9H4F8 434 aa8.8□□□□□ -1
USP3-208ENST00000558285 MTG2Q9H4K7 406 aa8.8□□□□□ -1
USP3-208ENST00000558285 ATP13A3Q9H7F0 1226 aa8.8□□□□□ -1
USP3-208ENST00000558285 NHEJ1Q9H9Q4 299 aaPredicted RBP8.8□□□□□ -1
USP3-208ENST00000558285 TM9SF3Q9HD45 589 aa8.8□□□□□ -1
USP3-208ENST00000558285 TMEM74BQ9NUR3 256 aa8.8□□□□□ -1
USP3-208ENST00000558285 KCTD5Q9NXV2 234 aa8.8□□□□□ -1
USP3-208ENST00000558285 ARHGAP20Q9P2F6 1191 aa8.8□□□□□ -1
USP3-208ENST00000558285 ZNF212Q9UDV6 495 aa8.8□□□□□ -1
USP3-208ENST00000558285 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
USP3-208ENST00000558285 PATE3B3GLJ2 98 aa8.79□□□□□ -1
USP3-208ENST00000558285 FAM72CH0Y354 149 aa8.79□□□□□ -1
USP3-208ENST00000558285 I6L893 689 aaPredicted RBP8.79□□□□□ -1
USP3-208ENST00000558285 TOR1BO14657 336 aa8.79□□□□□ -1
USP3-208ENST00000558285 GDF9O60383 454 aa8.79□□□□□ -1
USP3-208ENST00000558285 LEFTY1O75610 366 aa8.79□□□□□ -1
USP3-208ENST00000558285 ZNF189O75820 626 aaPredicted RBP8.79□□□□□ -1
USP3-208ENST00000558285 TMCC1O94876 653 aa8.79□□□□□ -1
USP3-208ENST00000558285 MT-CO1P00395 513 aa8.79□□□□□ -1
USP3-208ENST00000558285 ERCC2P18074 760 aa8.79□□□□□ -1
USP3-208ENST00000558285 MAOBP27338 520 aa8.79□□□□□ -1
USP3-208ENST00000558285 ACTN2P35609 894 aa8.79□□□□□ -1
USP3-208ENST00000558285 ACVRL1P37023 503 aa8.79□□□□□ -1
USP3-208ENST00000558285 CSNK1DP48730 415 aa8.79□□□□□ -1
USP3-208ENST00000558285 CDH6P55285 790 aa8.79□□□□□ -1
USP3-208ENST00000558285 GSDMDP57764 484 aa8.79□□□□□ -1
USP3-208ENST00000558285 AP1S1P61966 158 aa8.79□□□□□ -1
USP3-208ENST00000558285 OGDHQ02218 1023 aa8.79□□□□□ -1
USP3-208ENST00000558285 IFI16Q16666 785 aaKnown RBP8.79□□□□□ -1
USP3-208ENST00000558285 FAM72AQ5TYM5 149 aa8.79□□□□□ -1
USP3-208ENST00000558285 E4F1Q66K89 784 aaPredicted RBP8.79□□□□□ -1
USP3-208ENST00000558285 FAM72DQ6L9T8 149 aa8.79□□□□□ -1
USP3-208ENST00000558285 BRAT1Q6PJG6 821 aa8.79□□□□□ -1
USP3-208ENST00000558285 GDPD4Q6W3E5 623 aa8.79□□□□□ -1
USP3-208ENST00000558285 LEKR1Q6ZMV7 388 aa8.79□□□□□ -1
USP3-208ENST00000558285 HORMAD1Q86X24 394 aa8.79□□□□□ -1
USP3-208ENST00000558285 FAM72BQ86X60 149 aa8.79□□□□□ -1
USP3-208ENST00000558285 TMTC1Q8IUR5 882 aa8.79□□□□□ -1
USP3-208ENST00000558285 C10orf67Q8IYJ2 551 aa8.79□□□□□ -1
USP3-208ENST00000558285 AADATQ8N5Z0 425 aa8.79□□□□□ -1
USP3-208ENST00000558285 PDCD7Q8N8D1 485 aaKnown RBP8.79□□□□□ -1
USP3-208ENST00000558285 OR52K2Q8NGK3 314 aa8.79□□□□□ -1
USP3-208ENST00000558285 RFFLQ8WZ73 363 aa8.79□□□□□ -1
USP3-208ENST00000558285 HMCESQ96FZ2 354 aa8.79□□□□□ -1
USP3-208ENST00000558285 ZNF670Q9BS34 389 aa8.79□□□□□ -1
USP3-208ENST00000558285 CALN1Q9BXU9 219 aa8.79□□□□□ -1
USP3-208ENST00000558285 TM6SF2Q9BZW4 377 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms