RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 CR2P20023 1033 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 HLA-DPA1P20036 260 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 GLDCP23378 1020 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 IVDP26440 423 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 SERPINA4P29622 427 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 NPY2RP49146 381 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 BCL2L1Q07817 233 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CBLBQ13191 982 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 KCNJ11Q14654 390 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 STARD3Q14849 445 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 MYLK3Q32MK0 819 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 TJAP1Q5JTD0 557 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 EMBQ6PCB8 327 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 SERPINA13PQ6UXR4 307 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CENPUQ71F23 418 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CNPY4Q8N129 248 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 ZCCHC9Q8N567 271 aaKnown RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 PAF1Q8N7H5 531 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 NAT8LQ8N9F0 302 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 SORCS1Q8WY21 1168 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 CPT1BQ92523 772 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 EZH1Q92800 747 aaPredicted RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 FEM1CQ96JP0 617 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 RPL10LQ96L21 214 aaKnown RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 PARD6BQ9BYG5 372 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 BFARQ9NZS9 450 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 FBXL21Q9UKT6 434 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 SHROOM3Q8TF72 1996 aa12.56□□□□□ -0.4
TPM1-209ENST00000558072 MUC22E2RYF6 1773 aaPredicted RBP12.56□□□□□ -0.4
TPM1-209ENST00000558072 KRBA1A5PL33 1030 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 SYNCRIPO60506 623 aaKnown RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 ATG13O75143 517 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 CD160O95971 181 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 ALADP13716 330 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 CD68P34810 354 aaPredicted RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 CTSOP43234 321 aaPredicted RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 SUOXP51687 545 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 CDH17Q12864 832 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 ELAVL3Q14576 367 aaKnown RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 PON2Q15165 354 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 HIF1AQ16665 826 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 HNRNPA1L2Q32P51 320 aaKnown RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 EOGTQ5NDL2 527 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 FAM46CQ5VWP2 391 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 TMEM215Q68D42 235 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 LRRC8BQ6P9F7 803 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 NCEH1Q6PIU2 408 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 CHPFQ8IZ52 775 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 DNAAF3Q8N9W5 541 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 GLIS1Q8NBF1 620 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 SPOCK2Q92563 424 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 TADA1Q96BN2 335 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 MRGPRX3Q96LB0 322 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 UHRF1Q96T88 793 aaPredicted RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 TBL1YQ9BQ87 522 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 HEPHQ9BQS7 1158 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 CEP41Q9BYV8 373 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 HECAQ9UBI9 543 aaPredicted RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 LHX3Q9UBR4 397 aa12.55□□□□□ -0.4
TPM1-209ENST00000558072 FCF1Q9Y324 198 aaKnown RBP12.55□□□□□ -0.4
TPM1-209ENST00000558072 PRRT4C9JH25 899 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 C1QTNF3-AMACRE9PGA6 284 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 NDST3O95803 873 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 MT-CO1P00395 513 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 PDGFBP01127 241 aaPredicted RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 FGF1P05230 155 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 NTSR1P30989 418 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 CD86P42081 329 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 SEC13P55735 322 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 WNT3AP56704 352 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 SKOR1P84550 965 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 PDE1BQ01064 536 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 CDK18Q07002 472 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 ENPP2Q13822 863 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 ZNF234Q14588 700 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 ELF2Q15723 593 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 PTPRNQ16849 979 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 ARMC12Q5T9G4 340 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 KCTD11Q693B1 232 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 BRAT1Q6PJG6 821 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 PGBD5Q8N414 524 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 TMIEQ8NEW7 156 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 FBXO25Q8TCJ0 367 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 FRS2Q8WU20 508 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 CYB5D2Q8WUJ1 264 aa12.54□□□□□ -0.4
TPM1-209ENST00000558072 PTCD2Q8WV60 388 aaKnown RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 HNRNPLLQ8WVV9 542 aaKnown RBP12.54□□□□□ -0.4
TPM1-209ENST00000558072 PRCCQ92733 491 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms