RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 QKIQ96PU8 341 aaKnown RBP eCLIP8.66□□□□□ -1.023e-8■■■■■ 31.1
MARK3-210ENST00000556463 CDRT15Q96T59 188 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 C2orf49Q9BVC5 232 aaPredicted RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 MTMR12Q9C0I1 747 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 CCDC90BQ9GZT6 254 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 DBNDD1Q9H9R9 158 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ZBTB26Q9HCK0 441 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SUCOQ9UBS9 1254 aaKnown RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 ADAM28Q9UKQ2 775 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 BOLA1Q9Y3E2 137 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ANGPTL3Q9Y5C1 460 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TCRBV3S1A0A5B6 114 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TCAF2A6NFQ2 919 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 C3orf80F5H4A9 247 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TRIM24O15164 1050 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ASNA1O43681 348 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 H2AFYO75367 372 aaKnown RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 ZBTB7AO95365 584 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PRLP01236 227 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PSAPP07602 524 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SBK3P0C264 359 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 XKR3Q5GH77 459 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 NEPROQ6NW34 567 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TMEM26Q6ZUK4 368 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
MARK3-210ENST00000556463 CNTD1Q8N815 330 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 BHLHE22Q8NFJ8 381 aaPredicted RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 FAM151AQ8WW52 585 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ASB9Q96DX5 294 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 MARK4Q96L34 752 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 DEPDC7Q96QD5 511 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 POLR1BQ9H9Y6 1135 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ABCB10Q9NRK6 738 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SLC38A7Q9NVC3 462 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PCDH10Q9P2E7 1040 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SLC17A6Q9P2U8 582 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SNX13Q9Y5W8 968 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 CROCCQ5TZA2 2017 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 RNF103-CHMP3A0A140T963 221 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 APOL1O14791 398 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 AQP9O43315 295 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TSC22D2O75157 780 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PFKMP08237 780 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ASNSP08243 561 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ME2P23368 584 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ATP5OP48047 213 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 OCLNQ16625 522 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 NDUFA5Q16718 116 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PHKG1Q16816 387 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PLEKHG6Q3KR16 790 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 CCDC14Q49A88 953 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 BOLA3Q53S33 107 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PPM1JQ5JR12 505 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 FGD3Q5JSP0 725 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 SWSAP1Q6NVH7 229 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 OR7G1Q8NGA0 311 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.66□□□□□ -1.02
MARK3-210ENST00000556463 TFAP2CQ92754 450 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 CHID1Q9BWS9 393 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PTPRHQ9HD43 1115 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 TCF7L2Q9NQB0 619 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 PNPLA3Q9NST1 481 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 ADA2Q9NZK5 511 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 USP3Q9Y6I4 520 aa8.66□□□□□ -1.02
MARK3-210ENST00000556463 COL11A1P12107 1806 aaPredicted RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 TARM1B6A8C7 271 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 K7ERI5 159 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 NEMP1O14524 444 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 SNPHO15079 494 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 B4GALT4O60513 344 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 ZNF12P17014 697 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 GPD1P21695 349 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 BCL2A1Q16548 175 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 LSM12Q3MHD2 195 aaKnown RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 ZBED5Q49AG3 693 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 NANOGP8Q6NSW7 305 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 HMBOX1Q6NT76 420 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 NIPAL1Q6NVV3 410 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 PLD6Q8N2A8 252 aaKnown RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 FIBCD1Q8N539 461 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 SLC15A4Q8N697 577 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 TTLL6Q8N841 843 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 SNX19Q92543 992 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 TMA16Q96EY4 203 aaKnown RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 ZNF717Q9BY31 904 aaPredicted RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 VPS33BQ9H267 617 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 SPC25Q9HBM1 224 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 OXSMQ9NWU1 459 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 CD300AQ9UGN4 299 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 MYRFQ9Y2G1 1151 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 PCDHGA7Q9Y5G6 932 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 FARP2O94887 1054 aaPredicted RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 PGAM1P18669 254 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 DCKP27707 260 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 NUDT2P50583 147 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 TRAP1Q12931 704 aaKnown RBP8.65□□□□□ -1.02
MARK3-210ENST00000556463 ARHGEF6Q15052 776 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
MARK3-210ENST00000556463 LYSMD3Q7Z3D4 306 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms