RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 CLDN2P57739 230 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 SMTNL2Q2TAL5 461 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 CCDC157Q569K6 752 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 CCDC122Q5T0U0 273 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 CYP4V2Q6ZWL3 525 aaPredicted RBP18.67■□□□□ 0.58
NEDD1-208ENST00000555806 SAP25Q8TEE9 199 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 CALN1Q9BXU9 219 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 SLC17A9Q9BYT1 436 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 SLC39A8Q9C0K1 460 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 ZWILCHQ9H900 591 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 LHX3Q9UBR4 397 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 ITM2BQ9Y287 266 aa18.67■□□□□ 0.58
NEDD1-208ENST00000555806 J3KR12 359 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 DFFAO00273 331 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 CBFA2T2O43439 604 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 TNFSF14O43557 240 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 TSPAN6O43657 245 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 PRAMEF11O60813 436 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 PCK1P35558 622 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 RXRGP48443 463 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 PAPOLAP51003 745 aaKnown RBP18.66■□□□□ 0.58
NEDD1-208ENST00000555806 ZNF135P52742 658 aaPredicted RBP18.66■□□□□ 0.58
NEDD1-208ENST00000555806 BNIP3Q12983 259 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 ACAP1Q15027 740 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 CYTH1Q15438 398 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 LRRC73Q5JTD7 316 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 ALKBH5Q6P6C2 394 aaKnown RBP18.66■□□□□ 0.58
NEDD1-208ENST00000555806 PTAR1Q7Z6K3 402 aaPredicted RBP18.66■□□□□ 0.58
NEDD1-208ENST00000555806 HSPH1Q92598 858 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 ARHGEF26Q96DR7 871 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 NUP85Q9BW27 656 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 TSPY26PQ9H489 355 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 SP110Q9HB58 689 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 PDFQ9HBH1 243 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 TOR4AQ9NXH8 423 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
NEDD1-208ENST00000555806 GGT7Q9UJ14 662 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 ANAPC7Q9UJX3 599 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 MSRB2Q9Y3D2 182 aa18.66■□□□□ 0.58
NEDD1-208ENST00000555806 MAP1BP46821 2468 aaKnown RBP18.65■□□□□ 0.58
NEDD1-208ENST00000555806 A6NNZ2 444 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 H3BRJ5 948 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 INSIG1O15503 277 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 SDC3O75056 442 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 PAK4O96013 591 aaPredicted RBP18.65■□□□□ 0.58
NEDD1-208ENST00000555806 PROS1P07225 676 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 IL1R2P27930 398 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 ARL4AP40617 200 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 SGCGQ13326 291 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 FGL2Q14314 439 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 PIGHQ14442 188 aaPredicted RBP18.65■□□□□ 0.58
NEDD1-208ENST00000555806 GCNT7Q6ZNI0 430 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 TTC7BQ86TV6 843 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 ZSCAN30Q86W11 494 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 EID2Q8N6I1 236 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 OR13H1Q8NG92 308 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 BTBD6Q96KE9 485 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 CNDP2Q96KP4 475 aaKnown RBP18.65■□□□□ 0.58
NEDD1-208ENST00000555806 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.65■□□□□ 0.58
NEDD1-208ENST00000555806 IP6K2Q9UHH9 426 aa18.65■□□□□ 0.58
NEDD1-208ENST00000555806 TRPM6Q9BX84 2022 aa18.64■□□□□ 0.58
NEDD1-208ENST00000555806 IGLON5A6NGN9 336 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 PIGNO95427 931 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 LDOC1O95751 146 aaPredicted RBP18.64■□□□□ 0.57
NEDD1-208ENST00000555806 CYP1A2P05177 515 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 TCF4P15884 667 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 XPAP23025 273 aaPredicted RBP18.64■□□□□ 0.57
NEDD1-208ENST00000555806 HCAR3P49019 387 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 BOLA3Q53S33 107 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 ARHGAP12Q8IWW6 846 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 NPWQ8N729 165 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 FAM174AQ8TBP5 190 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 GATA6Q92908 595 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 VOPP1Q96AW1 172 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 MFHAS1Q9Y4C4 1052 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 HS3ST3A1Q9Y663 406 aa18.64■□□□□ 0.57
NEDD1-208ENST00000555806 ENC1O14682 589 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 RAD51BO15315 384 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 PALMO75781 387 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 EIF4A3P38919 411 aaKnown RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 SSR1P43307 286 aaKnown RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 DPYSQ14117 519 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 TRIM14Q14142 442 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 GRM3Q14832 879 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 DPYSL2Q16555 572 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 CFAP58Q5T655 872 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 AFMIDQ63HM1 303 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 SPECC1LQ69YQ0 1117 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 KYAT3Q6YP21 454 aaKnown RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 ARHGAP36Q6ZRI8 547 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 Q6ZSR6 202 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 ABI3BPQ7Z7G0 1075 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 NIPA2Q8N8Q9 360 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 CXorf40AQ8TE69 158 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 CINPQ9BW66 212 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 TMEM121BQ9BXQ6 578 aaPredicted RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 CPEB1Q9BZB8 566 aaKnown RBP18.63■□□□□ 0.57
NEDD1-208ENST00000555806 KLHL11Q9NVR0 708 aa18.63■□□□□ 0.57
NEDD1-208ENST00000555806 DKK3Q9UBP4 350 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms