RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 AFMIDQ63HM1 303 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 NAPEPLDQ6IQ20 393 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 CHST14Q8NCH0 376 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 OR6P1Q8NGX9 317 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 GANCQ8TET4 914 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 ZNF778Q96MU6 729 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 ACOX2Q99424 681 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 FAM83CQ9BQN1 747 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 SLC25A51Q9H1U9 297 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 LRRC4CQ9HCJ2 640 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 ELOVL2Q9NXB9 296 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 IGSF9Q9P2J2 1179 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 SLC17A6Q9P2U8 582 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 ZMYM5Q9UJ78 669 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 STOML2Q9UJZ1 356 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 SLC8A2Q9UPR5 921 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 RAI2Q9Y5P3 530 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 GOLGA6L10A6NI86 522 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 MBTPS2O43462 519 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 AP2A1O95782 977 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 IFI35P80217 286 aaPredicted RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 ITPRIPL2Q3MIP1 535 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 DPY19L3Q6ZPD9 716 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 OTUB2Q96DC9 234 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 MFSD3Q96ES6 412 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 GUCD1Q96NT3 240 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 ACE2Q9BYF1 805 aaPredicted RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 POLR3BQ9NW08 1133 aaPredicted RBP10.32□□□□□ -0.76
NEK9-205ENST00000555405 KCTD3Q9Y597 815 aa10.32□□□□□ -0.76
NEK9-205ENST00000555405 SDR42E2A6NKP2 422 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 SRCP12931 536 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 XPAP23025 273 aaPredicted RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 CDK18Q07002 472 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 BCL2L1Q07817 233 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 IHHQ14623 411 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 EFTUD2Q15029 972 aaKnown RBP eCLIP10.31□□□□□ -0.76
NEK9-205ENST00000555405 PDGFRLQ15198 375 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 EPS8L3Q8TE67 593 aaKnown RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 FBF1Q8TES7 1133 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 SEC14L1Q92503 715 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 RTP4Q96DX8 246 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 STAMBPL1Q96FJ0 436 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 NECTIN4Q96NY8 510 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 FCRL5Q96RD9 977 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 LRRC40Q9H9A6 602 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 IKBKGQ9Y6K9 419 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 FAM169AQ9Y6X4 670 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 C2orf16Q68DN1 1984 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 EXOC1LA0A1B0GW35 172 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 CD160O95971 181 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 PENKP01210 267 aaPredicted RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 EPHX1P07099 455 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 ALPIP09923 528 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 HPDP32754 393 aaPredicted RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 C5orf22Q49AR2 442 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 ACDQ96AP0 544 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 ALG14Q96F25 216 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 CTNNAL1Q9UBT7 734 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 A0A1W2PPC1 479 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 PLK4O00444 970 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 RIPK2O43353 540 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 ZMPSTE24O75844 475 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 KAT7O95251 611 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 TTC4O95801 387 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 IL1BP01584 269 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 SERPINH1P50454 418 aaKnown RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 GALK1P51570 392 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 CCNHP51946 323 aaPredicted RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 PON2Q15165 354 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 MPP7Q5T2T1 576 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 TRMT10BQ6PF06 316 aaKnown RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 TXNDC11Q6PKC3 985 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 PSKH2Q96QS6 385 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 PABPC3Q9H361 631 aaKnown RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 ACBD3Q9H3P7 528 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 XAB2Q9HCS7 855 aaKnown RBP10.31□□□□□ -0.76
NEK9-205ENST00000555405 HAUS2Q9NVX0 235 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 ERVW-1Q9UQF0 538 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 OR51B4Q9Y5P0 310 aa10.31□□□□□ -0.76
NEK9-205ENST00000555405 FAM47DPA6NHR8 397 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 IGSF6O95976 241 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 ERVK-10P10266 1014 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 RAD51Q06609 339 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 CDH17Q12864 832 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 CNGA3Q16281 694 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 C4orf22Q6V702 233 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 MTSS1LQ765P7 747 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 ADIPOR2Q86V24 386 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 ARRDC2Q8TBH0 407 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 HNRNPLLQ8WVV9 542 aaKnown RBP10.3□□□□□ -0.76
NEK9-205ENST00000555405 MAML1Q92585 1016 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 NSMCE3Q96MG7 304 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 KLF6Q99612 283 aaPredicted RBP10.3□□□□□ -0.76
NEK9-205ENST00000555405 CCDC77Q9BR77 488 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 SLC2A6Q9UGQ3 507 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 DOCK4Q8N1I0 1966 aa10.3□□□□□ -0.76
NEK9-205ENST00000555405 DLDP09622 509 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms