RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CPP00450 1065 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 HSD17B3P37058 310 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 GRIA1P42261 906 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 GRIA2P42262 883 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 RGRP47804 291 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 NPY2RP49146 381 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SCNN1BP51168 640 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 EIF3BP55884 814 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 RPL26P61254 145 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 ST8SIA6P61647 398 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 PFKPQ01813 784 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 CDK18Q07002 472 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 UAP1Q16222 522 aaPredicted RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 BBS9Q3SYG4 887 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 MSS51Q4VC12 460 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 FNBP1LQ5T0N5 605 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 FAM182AQ5T1J6 154 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 ALS2CLQ60I27 953 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 TMEM215Q68D42 235 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 DENND2CQ68D51 928 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 LRIG3Q6UXM1 1119 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 RANBP10Q6VN20 620 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SRLQ86TD4 932 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 DNAAF3Q8N9W5 541 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 FBXO36Q8NEA4 188 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 OR2AP1Q8NGE2 309 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 CSGALNACT1Q8TDX6 532 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 PYROXD1Q8WU10 500 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 MRGPRX3Q96LB0 322 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SIGLEC10Q96LC7 697 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 TUBGCP5Q96RT8 1024 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 TRIB3Q96RU7 358 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 EBNA1BP2Q99848 306 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 RPP25Q9BUL9 199 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 TDRD1Q9BXT4 1180 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 CPEB1Q9BZB8 566 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 CIPCQ9C0C6 399 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 EPB41L4BQ9H329 900 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 ACBD3Q9H3P7 528 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SEMA4AQ9H3S1 761 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 C8orf33Q9H7E9 229 aaPredicted RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 KCNK12Q9HB15 430 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 NOD2Q9HC29 1040 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 ZNF446Q9NWS9 450 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 NINJ2Q9NZG7 142 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 UBP1Q9NZI7 540 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 RPL26L1Q9UNX3 145 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 ERVW-1Q9UQF0 538 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 ACTL7AQ9Y615 435 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
TDP1-209ENST00000554180 F5P12259 2224 aa7.74□□□□□ -1.17
TDP1-209ENST00000554180 A0A1W2PQ67 120 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 WASH3PC4AMC7 463 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PRRT4C9JH25 899 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 K7ERQ8 282 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 TRIM24O15164 1050 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 AVILO75366 819 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 KAT7O95251 611 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 POP4O95707 220 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 APODP05090 189 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 ATXN1LP0C7T5 689 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 ALADP13716 330 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 GLULP15104 373 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PGAM1P18669 254 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 SP100P23497 879 aaPredicted RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 SERPINA4P29622 427 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PHBP35232 272 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 ELK3P41970 407 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 SLC6A11P48066 632 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 NUMBP49757 651 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 STK19P49842 368 aaPredicted RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 KDSRQ06136 332 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 RAD51Q06609 339 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 LAMB3Q13751 1172 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 FRG1Q14331 258 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 SPARCL1Q14515 664 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 FASTKD3Q14CZ7 662 aaKnown RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 DLG2Q15700 870 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 SLC1A5Q15758 541 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 KYNUQ16719 465 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PTPRNQ16849 979 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 AAK1Q2M2I8 961 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 DGKKQ5KSL6 1271 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 SYCP2LQ5T4T6 812 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 STEAP4Q687X5 459 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 DENND5AQ6IQ26 1287 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 PTCRAQ6ISU1 281 aaPredicted RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 ZNF449Q6P9G9 518 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 NCEH1Q6PIU2 408 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 CYS1Q717R9 158 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 CROCCP2Q86T23 111 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 RALGPS2Q86X27 583 aaPredicted RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 IQCKQ8N0W5 287 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 CNPY4Q8N129 248 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 SLC44A3Q8N4M1 653 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.73□□□□□ -1.17
TDP1-209ENST00000554180 ST13P5Q8NFI4 369 aaPredicted RBP7.73□□□□□ -1.17
TDP1-209ENST00000554180 OR52K1Q8NGK4 314 aa7.73□□□□□ -1.17
TDP1-209ENST00000554180 FRS2Q8WU20 508 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms