RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 RBM17Q96I25 401 aaKnown RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 PPP1R10Q96QC0 940 aaKnown RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 PAGR1Q9BTK6 254 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 MMTAG2Q9BU76 263 aaKnown RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 MVB12BQ9H7P6 319 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 CLK4Q9HAZ1 481 aaKnown RBP4.16□□□□□ -1.74
SCFD1-210ENST00000553693 ENTPD7Q9NQZ7 604 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 SUFUQ9UMX1 484 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 CNPY2Q9Y2B0 182 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 DAAM1Q9Y4D1 1078 aa4.16□□□□□ -1.74
SCFD1-210ENST00000553693 BUB3O43684 328 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 TK1P04183 234 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 DHRS4L1P0CG22 281 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 ADD2P35612 726 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 GRSF1Q12849 480 aaKnown RBP eCLIP4.15□□□□□ -1.75
SCFD1-210ENST00000553693 CHAF1AQ13111 956 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-210ENST00000553693 TRIM14Q14142 442 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 JMJD6Q6NYC1 403 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-210ENST00000553693 DENND1BQ6P3S1 775 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 SPICE1Q8N0Z3 855 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 SAMD3Q8N6K7 520 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 LINS1Q8NG48 757 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 RASSF8Q8NHQ8 419 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 WFIKKN2Q8TEU8 576 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 TRAPPC12Q8WVT3 735 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 SH3KBP1Q96B97 665 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 MASTLQ96GX5 879 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 CTDSP1Q9GZU7 261 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 CHODLQ9H9P2 273 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 SPATS2LQ9NUQ6 558 aaKnown RBP4.15□□□□□ -1.75
SCFD1-210ENST00000553693 NLKQ9UBE8 527 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 CD207Q9UJ71 328 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 DERAQ9Y315 318 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 NFS1Q9Y697 457 aa4.15□□□□□ -1.75
SCFD1-210ENST00000553693 A0A087WYN8 130 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 ERVV-2B6SEH9 535 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 FAM155BO75949 473 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 ADAP00813 363 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 F7P08709 466 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-210ENST00000553693 FMO4P31512 558 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 PTPN9P43378 593 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 CENPAP49450 140 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 ARSFP54793 590 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 DLX5P56178 289 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 ACTR2P61160 394 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 SLC18A2Q05940 514 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 MYBPHQ13203 477 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 CUL4BQ13620 913 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 PRKG1Q13976 671 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 MORC3Q14149 939 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 LPIN1Q14693 890 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 ZRSR1Q15695 479 aaKnown RBP4.14□□□□□ -1.75
SCFD1-210ENST00000553693 PDCD2Q16342 344 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-210ENST00000553693 CTXN3Q4LDR2 81 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 PLEKHO1Q53GL0 409 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-210ENST00000553693 CBWD5Q5RIA9 395 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 FAM83BQ5T0W9 1011 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 RETSATQ6NUM9 610 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 CCDC105Q8IYK2 499 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 TMEM57Q8N5G2 664 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 GPT2Q8TD30 523 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 INPP4AQ96PE3 977 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-210ENST00000553693 TTC12Q9H892 705 aaPredicted RBP4.14□□□□□ -1.75
SCFD1-210ENST00000553693 KIF17Q9P2E2 1029 aa4.14□□□□□ -1.75
SCFD1-210ENST00000553693 ERCC6Q03468 1493 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 A0A0B4J293 547 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-210ENST00000553693 PRSS47A8MTI9 375 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 TIMM23O14925 209 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 GRID2O43424 1007 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 VNN2O95498 520 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 VEGFAP15692 232 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-210ENST00000553693 ECT2LQ008S8 904 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 CYP4A11Q02928 519 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 CAPSQ13938 189 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 KRT72Q14CN4 511 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 SF3B4Q15427 424 aaKnown RBP eCLIP4.13□□□□□ -1.754e-7■■□□□ 13.4
SCFD1-210ENST00000553693 CALCRLQ16602 461 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 KRTAP27-1Q3LI81 207 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 ADCK5Q3MIX3 580 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 XKR9Q5GH70 373 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 SH2D4BQ5SQS7 431 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 SFTPA2Q8IWL1 248 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 MB21D2Q8IYB1 491 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-210ENST00000553693 AADATQ8N5Z0 425 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 DNAAF1Q8NEP3 725 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 RFWD2Q8NHY2 731 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 TRIB2Q92519 343 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 HSPH1Q92598 858 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 MTBPQ96DY7 904 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 RNFT2Q96EX2 444 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 BICD1Q96G01 975 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 IL17FQ96PD4 163 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 OR1F2PQ96R84 312 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 GAREM1Q9H706 876 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 RASSF1Q9NS23 344 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 HDAC6Q9UBN7 1215 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 TAGLN3Q9UI15 199 aa4.13□□□□□ -1.75
SCFD1-210ENST00000553693 SAA2-SAA4A0A096LPE2 208 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms