RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SIN3BO75182 1162 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SPAG7O75391 227 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 DCTN3O75935 186 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 FGF19O95750 216 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 PEX11BO96011 259 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 MPOP05164 745 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 APOA4P06727 396 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TROVE2P10155 538 aaKnown RBP eCLIP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 RAG1P15918 1043 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 HMGA1P17096 107 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 HOXB8P17481 243 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TACR2P21452 398 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ADRA1AP35348 466 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ETV4P43268 484 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SERPINB8P50452 374 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 LIMK2P53671 638 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 OXCT1P55809 520 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 WDR5P61964 334 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CTBSQ01459 385 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TNP2Q05952 138 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 IFT88Q13099 833 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 POLD3Q15054 466 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC153Q494R4 210 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 RALGPS1Q5JS13 557 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SDHAF4Q5VUM1 108 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 RAP1GAP2Q684P5 730 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ALG1LQ6GMV1 187 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TRMT10BQ6PF06 316 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 RANBP10Q6VN20 620 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC149Q6ZUS6 474 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TAS1R1Q7RTX1 841 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 GALNT7Q86SF2 657 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 C14orf80Q86SX3 495 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 RASSF3Q86WH2 238 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CNTN4Q8IWV2 1026 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TP53INP2Q8IXH6 220 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 MPP5Q8N3R9 675 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CCDC33Q8N5R6 958 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TTC9BQ8N6N2 239 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CALML6Q8TD86 181 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SREK1Q8WXA9 508 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 PPM1EQ8WY54 764 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF75CPQ92670 426 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 PSMG2Q969U7 264 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 TADA1Q96BN2 335 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 MRRFQ96E11 262 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 HMCESQ96FZ2 354 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SERAC1Q96JX3 654 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 B3GALT6Q96L58 329 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SRPK1Q96SB4 655 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 PAIP2Q9BPZ3 127 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ELAC2Q9BQ52 826 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 FAM167BQ9BTA0 163 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 FSD1LQ9BXM9 530 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CEP41Q9BYV8 373 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 POLR1EQ9GZS1 481 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 FAM96AQ9H5X1 160 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 NOL6Q9H6R4 1146 aaKnown RBP7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SP110Q9HB58 689 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 CYP4F11Q9HBI6 524 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ATP13A1Q9HD20 1204 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 IL23AQ9NPF7 189 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SMYD2Q9NRG4 433 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 MPP6Q9NZW5 540 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF212Q9UDV6 495 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 RIMKLBQ9ULI2 386 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 LZTS1Q9Y250 596 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 ZNF510Q9Y2H8 683 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 YIPF1Q9Y548 306 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 SNX10Q9Y5X0 201 aa7.41□□□□□ -1.22
ATXN3-221ENST00000553498 A0A1B0GVM2 712 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TYW5A2RUC4 315 aaKnown RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TCAF2A6NFQ2 919 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 CXorf49A8MYA2 514 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 PRRG1O14668 218 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ATXN7O15265 892 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 COCHO43405 550 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 HNRNPCL1O60812 293 aaKnown RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 H2AFYO75367 372 aaKnown RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ATP5HO75947 161 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 FSBPO95073 299 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SNUPNO95149 360 aaKnown RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 OLFM2O95897 454 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 TBX18O95935 607 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 ITGA2BP08514 1039 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 CTSAP10619 480 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 COL6A2P12110 1019 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 HLA-DPA1P20036 260 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 OR1E1P30953 314 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SKIV2L2P42285 1042 aaKnown RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 MAGEA9P43362 315 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 MAGEA12P43365 314 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SERPINB4P48594 390 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 GSK3AP49840 483 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 PRKAA2P54646 552 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 HTRA4P83105 476 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 PDE1BQ01064 536 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 PPIGQ13427 754 aaKnown RBP eCLIP7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SETDB1Q15047 1291 aa7.4□□□□□ -1.22
ATXN3-221ENST00000553498 SLC1A5Q15758 541 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms