RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 UBXN6Q9BZV1 441 aa11.47□□□□□ -0.57
GPN3-208ENST00000550974 TRIT1Q9H3H1 467 aaKnown RBP11.47□□□□□ -0.57
GPN3-208ENST00000550974 CROTQ9UKG9 612 aa11.47□□□□□ -0.57
GPN3-208ENST00000550974 RPS6KL1Q9Y6S9 549 aa11.47□□□□□ -0.57
GPN3-208ENST00000550974 CLIC2O15247 247 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 NUDT21O43809 227 aaKnown RBP11.46□□□□□ -0.57
GPN3-208ENST00000550974 MOCS2O96007 188 aaPredicted RBP11.46□□□□□ -0.57
GPN3-208ENST00000550974 CD99P14209 185 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 CD58P19256 250 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 NOP2P46087 812 aaKnown RBP11.46□□□□□ -0.57
GPN3-208ENST00000550974 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
GPN3-208ENST00000550974 PLK1P53350 603 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
GPN3-208ENST00000550974 RAP1GAP2Q684P5 730 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 SLC6A19Q695T7 634 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 OGFOD3Q6PK18 319 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 ENPP7Q6UWV6 458 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 NYAP1Q6ZVC0 841 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 CDH24Q86UP0 819 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 CIR1Q86X95 450 aaPredicted RBP11.46□□□□□ -0.57
GPN3-208ENST00000550974 GLIS1Q8NBF1 620 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 CENPTQ96BT3 561 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 PPP1R16AQ96I34 528 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 TWSG1Q9GZX9 223 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 DPEP2Q9H4A9 486 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 LRRC4Q9HBW1 653 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 IL36AQ9UHA7 158 aa11.46□□□□□ -0.57
GPN3-208ENST00000550974 TULP2O00295 520 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 NEMP1O14524 444 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 PRICKLE3O43900 615 aaPredicted RBP11.45□□□□□ -0.58
GPN3-208ENST00000550974 LEFTY1O75610 366 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 CD1CP29017 333 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 GJB2P29033 226 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 MAN1A1P33908 653 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 CCL11P51671 97 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 SLC8A3P57103 927 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 KRTAP10-9P60411 292 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 INCA1Q0VD86 236 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 ADIGQ0VDE8 80 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 CHAF1BQ13112 559 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 MSANTD2Q6P1R3 559 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 TAF8Q7Z7C8 310 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 CCAR2Q8N163 923 aaKnown RBP11.45□□□□□ -0.58
GPN3-208ENST00000550974 CISD2Q8N5K1 135 aaKnown RBP11.45□□□□□ -0.58
GPN3-208ENST00000550974 ESX1Q8N693 406 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 BMPERQ8N8U9 685 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 ATP11CQ8NB49 1132 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 XXYLT1Q8NBI6 393 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 RNF31Q96EP0 1072 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 MDFIQ99750 246 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 MBNL1Q9NR56 388 aaKnown RBP11.45□□□□□ -0.58
GPN3-208ENST00000550974 PANK4Q9NVE7 773 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 COPG2Q9UBF2 871 aa11.45□□□□□ -0.58
GPN3-208ENST00000550974 XPO7Q9UIA9 1087 aaKnown RBP11.45□□□□□ -0.58
GPN3-208ENST00000550974 TMEM184BQ9Y519 407 aaPredicted RBP11.45□□□□□ -0.58
GPN3-208ENST00000550974 MN1Q10571 1320 aaPredicted RBP11.44□□□□□ -0.58
GPN3-208ENST00000550974 TRPM6Q9BX84 2022 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 PIPSLA2A3N6 862 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 ZSCAN5CA6NGD5 496 aaPredicted RBP11.44□□□□□ -0.58
GPN3-208ENST00000550974 RHPN2P1A8MT19 583 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 K7ERQ8 282 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 EIF3DO15371 548 aaKnown RBP eCLIP11.44□□□□□ -0.58
GPN3-208ENST00000550974 DPM1O60762 260 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 MT-CO1P00395 513 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 THRAP10827 490 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 SRCP12931 536 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 COX6B1P14854 86 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 CD1EP15812 388 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 ITGA1P56199 1179 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 CLPPQ16740 277 aaPredicted RBP11.44□□□□□ -0.58
GPN3-208ENST00000550974 RILPL1Q5EBL4 403 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 NKAIN2Q5VXU1 208 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 CEACAM20Q6UY09 585 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 ZSCAN30Q86W11 494 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 CHSY1Q86X52 802 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 FAM184AQ8NB25 1140 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 OR4D9Q8NGE8 314 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 PLEKHO2Q8TD55 490 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 ASB12Q8WXK4 309 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 TATDN2Q93075 761 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 FCRL2Q96LA5 508 aaPredicted RBP11.44□□□□□ -0.58
GPN3-208ENST00000550974 DNAI2Q9GZS0 605 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 APMAPQ9HDC9 416 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 MLXIPLQ9NP71 852 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 AGPAT3Q9NRZ7 376 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 TMEM9Q9P0T7 183 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 ITM2BQ9Y287 266 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 ZNF451Q9Y4E5 1061 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 PCDHGA9Q9Y5G4 932 aaKnown RBP11.44□□□□□ -0.58
GPN3-208ENST00000550974 ANKHD1Q8IWZ3 2542 aaKnown RBP11.44□□□□□ -0.58
GPN3-208ENST00000550974 CCDC168Q8NDH2 2452 aa11.44□□□□□ -0.58
GPN3-208ENST00000550974 LRRIQ3A6PVS8 624 aaPredicted RBP11.43□□□□□ -0.58
GPN3-208ENST00000550974 ZW10O43264 779 aa11.43□□□□□ -0.58
GPN3-208ENST00000550974 EPB41L2O43491 1005 aaKnown RBP11.43□□□□□ -0.58
GPN3-208ENST00000550974 TSPAN6O43657 245 aa11.43□□□□□ -0.58
GPN3-208ENST00000550974 AP1G1O43747 822 aa11.43□□□□□ -0.58
GPN3-208ENST00000550974 EIF5BO60841 1220 aaKnown RBP11.43□□□□□ -0.58
GPN3-208ENST00000550974 ENDOD1O94919 500 aa11.43□□□□□ -0.58
GPN3-208ENST00000550974 TNFP01375 233 aa11.43□□□□□ -0.58
GPN3-208ENST00000550974 BPIP17213 487 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms