RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 CABIN1Q9Y6J0 2220 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 C16orf96A6NNT2 1141 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 A6NNZ2 444 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 RNF223E7ERA6 249 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 CCP110O43303 1012 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 BUB1O43683 1085 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 RAMP2O60895 175 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 MT-CO3P00414 261 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 GIMD1P0DJR0 217 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 GPD1P21695 349 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 ACP1P24666 158 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 ITGB7P26010 798 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 EIF2S3P41091 472 aaKnown RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 PTPN9P43378 593 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 NSFP46459 744 aaKnown RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 MAPKAPK2P49137 400 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 RPS21P63220 83 aaKnown RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 UBXN1Q04323 297 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 SGCGQ13326 291 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 ZNF211Q13398 564 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 FZD2Q14332 565 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 POLD3Q15054 466 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 MYLK3Q32MK0 819 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 CT47A1Q5JQC4 288 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 ARCQ7LC44 396 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 STRADAQ7RTN6 431 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 TTC7BQ86TV6 843 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 DNAAF5Q86Y56 855 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 OR4C6Q8NH72 309 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 CENPIQ92674 756 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 NXPE2Q96DL1 559 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 APOLD1Q96LR9 279 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 BBC3Q96PG8 261 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-228ENST00000550929 TMEM248Q9NWD8 314 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 GPATCH2LQ9NWQ4 482 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 KLF15Q9UIH9 416 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 HPCAL4Q9UM19 191 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 NEU3Q9UQ49 428 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 CLCA2Q9UQC9 943 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 PCDHB1Q9Y5F3 818 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 HS3ST3A1Q9Y663 406 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 ADAMTS20P59510 1910 aa9.19□□□□□ -0.94
LETMD1-228ENST00000550929 A0A087WV48 116 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 CPED1A4D0V7 1026 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 K7ESM1 405 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 FPGTO14772 594 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 INSIG1O15503 277 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 SPINT1O43278 529 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 KDELR3O43731 214 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 CREB3O43889 395 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 BRINP1O60477 761 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 MMP20O60882 483 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 TMCC1O94876 653 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 CDK4P11802 303 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 EPHB2P29323 1055 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 ETFBP38117 255 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 ABCG1P45844 678 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 SNRPD1P62314 119 aaKnown RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 RPL7AP62424 266 aaKnown RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 NRG1Q02297 640 aaPredicted RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 ILKQ13418 452 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 C1orf61Q13536 156 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 PDE1CQ14123 709 aaPredicted RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 DEFB133Q30KQ1 61 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 ZNF805Q5CZA5 627 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 KIAA1161Q6NSJ0 714 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 CRTC1Q6UUV9 634 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 SASS6Q6UVJ0 657 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 GDPD4Q6W3E5 623 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 KYAT3Q6YP21 454 aaKnown RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 TRIM72Q6ZMU5 477 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 SLFN11Q7Z7L1 901 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 VPS36Q86VN1 386 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 RBFAQ8N0V3 343 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 OR2AP1Q8NGE2 309 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 LMX1AQ8TE12 382 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 HMCESQ96FZ2 354 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 NAF1Q96HR8 494 aaKnown RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 MCEEQ96PE7 176 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 KLF6Q99612 283 aaPredicted RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 AGPAT1Q99943 283 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 MAGEH1Q9H213 219 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 TCEAL2Q9H3H9 227 aaPredicted RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 NOL6Q9H6R4 1146 aaKnown RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 LIMA1Q9UHB6 759 aaKnown RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 RAI2Q9Y5P3 530 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 DOCK9Q9BZ29 2069 aa9.18□□□□□ -0.94
LETMD1-228ENST00000550929 TP53BP1Q12888 1972 aaPredicted RBP9.18□□□□□ -0.94
LETMD1-228ENST00000550929 COL5A1P20908 1838 aaPredicted RBP9.17□□□□□ -0.94
LETMD1-228ENST00000550929 SPTY2D1-AS1A0A0U1RR47 76 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 SIGLEC16A6NMB1 481 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 LGALS16A8MUM7 142 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 TMCO5BA8MYB1 307 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 RASA4BC9J798 803 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 SCAMP1O15126 338 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 CASC3O15234 703 aaKnown RBP9.17□□□□□ -0.94
LETMD1-228ENST00000550929 RASA4O43374 803 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 TSPAN6O43657 245 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 AP1G1O43747 822 aa9.17□□□□□ -0.94
LETMD1-228ENST00000550929 OPA1O60313 960 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms